Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MTF1	Gene	0	59.70	47.35	82.77	44.08	28.34	23.84	68.08
2	373036	Transcript	0	68.77	74.17	130.84	68.25	33.30	36.08	108.80
3	ER1a	ExonRegion	0	33.37	15.40	43.57	12.55	23.73	8.79	32.22
4	E1a_E2a	KnownJunction	0	86.19	39.20	119.04	33.32	34.21	23.53	81.35
5	ER2a	ExonRegion	0	56.39	81.76	100.08	51.44	22.38	37.30	85.07
6	E2_Da	NovelBoundary	1	20.28	3.78	37.35	5.88	0.00	0.00	3.80
7	E2a_E3a	KnownJunction	0	66.13	70.67	111.38	68.49	31.88	30.77	108.42
8	ER3a	ExonRegion	0	54.54	91.23	101.18	70.73	27.14	36.80	102.58
9	E3a_E4a	KnownJunction	0	52.84	96.52	110.23	60.12	32.92	49.07	118.28
10	ER4a	ExonRegion	0	71.45	88.60	150.75	75.39	35.54	40.28	133.36
11	E4a_E5a	KnownJunction	0	89.39	80.13	155.54	90.43	26.67	34.57	139.06
12	ER5a	ExonRegion	0	84.76	96.30	175.22	93.37	40.19	45.10	139.74
13	E5_Da	NovelBoundary	1	29.21	0.00	74.35	0.00	0.00	0.00	0.54
14	E5a_E6a	KnownJunction	0	110.49	109.60	197.32	90.08	41.15	56.55	129.04
15	ER6a	ExonRegion	0	85.33	106.24	181.27	102.05	37.98	46.58	145.19
16	E6a_E7a	KnownJunction	0	62.47	91.27	168.35	102.97	28.79	42.18	117.32
17	ER7a	ExonRegion	0	96.40	87.75	182.39	99.49	42.76	43.46	141.98
18	E7a_E8a	KnownJunction	0	95.57	74.98	172.03	67.13	48.04	42.45	122.78
19	ER8a	ExonRegion	0	86.14	88.81	190.44	90.30	51.61	42.65	155.99
20	E8a_E9a	KnownJunction	0	74.57	93.26	163.88	70.38	48.23	45.16	140.45
21	ER9a	ExonRegion	0	60.60	66.91	95.53	67.28	29.11	33.83	102.95
22	E9a_E10a	KnownJunction	0	41.12	54.75	106.63	43.24	21.83	29.77	89.31
23	I9_SR2	SilentIntronRegion	0	8.13	11.30	4.87	4.91	2.57	3.17	5.64
24	E10_Aa	NovelBoundary	0	13.19	15.34	6.48	4.09	1.13	2.65	4.23
25	ER10a	ExonRegion	0	38.39	46.16	85.57	50.05	26.90	25.80	79.09
26	E10a_E11a	KnownJunction	0	39.40	40.62	65.24	58.06	20.49	23.26	64.92
27	E11_Aa	NovelBoundary	0	11.37	19.55	8.32	21.08	2.05	12.78	3.67
28	ER11a	ExonRegion	0	58.61	37.43	71.98	36.43	27.74	19.79	55.81
29	IG2	Intergenic	0	9.58	2.43	10.28	4.95	3.58	1.65	2.68
30	IG2_SR2	SilentIntergenicRegion	0	9.90	1.39	9.80	2.65	3.58	0.99	1.74
31	IG2_SR1	SilentIntergenicRegion	0	9.15	3.05	10.48	6.31	3.51	2.06	3.25