Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 HIVEP3 Gene 0 84.46 98.63 38.32 59.44 0.28 164.92 4.15 2 372584 Transcript 0 4.46 10.35 3.26 8.41 0.07 23.18 0.53 3 372583 Transcript 0 0.00 2.47 0.82 4.44 1.18 0.00 0.00 4 247584 Transcript 0 0.00 0.52 0.10 0.53 0.12 0.00 0.00 5 ER1a ExonRegion 0 1.32 2.40 0.07 2.36 0.20 0.12 0.42 6 E1_Ab KnownBoundary 0 5.07 6.73 0.73 5.91 0.00 1.34 2.02 7 ER1b ExonRegion 0 2.03 6.16 1.67 9.27 0.24 1.98 3.79 8 E1a_E2b KnownJunction 0 0.00 2.47 0.82 4.44 1.18 0.00 0.00 9 E1a_E3a KnownJunction 0 0.00 1.63 0.00 1.68 0.00 0.00 0.00 10 I1_AR22 ActiveIntronRegion 1 8.96 34.08 9.16 24.45 0.37 4.59 11.12 11 I1_AR23 ActiveIntronRegion 1 16.70 39.44 16.67 25.81 1.62 7.99 18.19 12 ER2a ExonRegion 0 0.00 0.52 0.10 0.53 0.12 0.00 0.00 13 ER2b ExonRegion 0 0.13 6.78 0.29 6.95 0.26 1.68 0.00 14 E2a_E3a KnownJunction 0 1.25 8.30 0.57 10.62 0.00 3.32 0.00 15 ER3a ExonRegion 0 29.04 110.62 16.63 45.97 0.41 117.88 1.39 16 E3_Da NovelBoundary 1 4.51 41.54 3.61 6.85 0.00 18.95 0.00 17 E3a_E4a KnownJunction 0 64.46 111.89 27.13 43.29 0.00 124.32 5.40 18 E3a_E5a NovelJunction 0 0.00 9.69 0.80 3.36 0.00 19.94 0.00 19 E3a_E6a NovelJunction 0 0.80 13.21 1.57 11.27 0.00 22.78 0.00 20 E3a_E7a NovelJunction 0 2.89 41.43 2.31 26.22 0.00 98.68 0.00 21 I3_AR1 ActiveIntronRegion 0 8.46 27.18 3.89 11.78 0.00 34.66 0.91 22 I3_SR2 SilentIntronRegion 0 9.02 34.55 3.34 9.22 0.00 39.08 0.02 23 I3_AR2 ActiveIntronRegion 0 11.48 39.71 5.86 12.77 0.00 47.56 0.11 24 I3_AR3 ActiveIntronRegion 0 11.92 26.55 6.70 14.84 0.00 42.20 0.38 25 I3_AR4 ActiveIntronRegion 0 17.19 27.72 8.50 16.89 0.00 50.15 0.67 26 E4_Aa NovelBoundary 0 35.18 13.95 11.08 7.31 0.00 11.26 0.00 27 ER4a ExonRegion 0 109.10 111.36 44.39 60.91 0.40 131.41 5.99 28 E4a_E5a KnownJunction 0 64.09 74.43 36.16 50.15 0.00 109.80 3.45 29 ER5a ExonRegion 0 69.81 86.64 34.37 46.08 0.26 114.13 3.21 30 E5a_E6a KnownJunction 0 54.19 57.17 26.57 35.46 0.00 77.29 3.40 31 E5a_E7a NovelJunction 0 13.13 38.88 9.18 23.54 0.00 55.42 0.72 32 I5_SR2 SilentIntronRegion 0 18.40 11.09 5.03 3.39 0.04 5.72 1.92 33 ER6a ExonRegion 0 117.10 85.85 57.22 55.65 0.02 161.50 5.27 34 E6a_E7a KnownJunction 0 96.63 81.44 56.25 66.05 0.00 161.76 4.86 35 I6_AR3 ActiveIntronRegion 0 22.00 18.70 7.53 5.13 0.13 11.97 0.77 36 ER7a ExonRegion 0 196.00 164.37 84.82 107.17 0.00 317.94 8.15 37 E7a_E8a KnownJunction 0 229.65 207.44 97.10 144.80 0.00 399.40 8.17 38 ER8a ExonRegion 0 95.04 163.86 43.81 86.87 0.26 279.62 4.42 39 E8a_E9a KnownJunction 0 55.86 125.60 30.95 79.54 0.00 199.26 2.44 40 E8a_E9b KnownJunction 0 12.07 27.03 9.71 21.19 0.00 69.44 1.16 41 E9_Ab NovelBoundary 0 24.40 5.33 13.75 1.35 0.00 1.39 1.56 42 ER9a ExonRegion 0 65.12 127.56 33.87 91.34 0.00 217.92 3.20 43 ER9b ExonRegion 0 82.53 115.55 36.02 75.25 0.39 230.55 3.86 44 E9_Da KnownBoundary 1 95.68 61.16 53.77 70.55 0.00 199.55 1.89 45 ER9c ExonRegion 0 52.81 65.35 31.70 50.71 0.09 182.48 1.73