Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RHD	Gene	0	10.58	5.02	11.19	6.56	14.16	7.00	1.37
2	342055	Transcript	0	2.00	1.26	1.95	0.74	1.52	0.38	0.20
3	328664	Transcript	0	0	0	0	0	0	0	0
4	357542	Transcript	0	0	0	0	0	0	0	0
5	IG20_AR3	ActiveIntergenicRegion	0	7.64	4.02	8.91	3.12	3.98	1.89	0.37
6	IG20_SR3	SilentIntergenicRegion	0	3.88	3.60	9.22	2.91	5.45	2.65	0.22
7	IG20_AR6	ActiveIntergenicRegion	0	37.73	19.10	40.76	14.32	12.88	14.62	0.52
8	IG20_SR5	SilentIntergenicRegion	0	8.08	17.06	7.64	9.10	8.58	13.95	0.12
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.63	0.00
12	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.66	1.99	0.00
14	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER3a	ExonRegion	0	0.00	1.83	0.00	2.51	2.77	3.05	0.00
16	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E4_Aa	NovelBoundary	0	0.00	8.09	0.82	3.06	0.00	5.55	0.00
18	ER4a	ExonRegion	0	0.00	1.87	0.00	2.57	2.15	3.15	0.00
19	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER5a	ExonRegion	0	0.01	1.66	0.32	6.82	2.34	3.93	0.01
21	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	3.30	0.00	0.00
22	I5	Intron	0	0.52	8.15	0.65	7.62	3.38	9.92	0.00
23	I5_SR1	SilentIntronRegion	0	0.52	8.16	0.65	7.63	3.39	9.94	0.00
24	ER6a	ExonRegion	0	0.81	4.01	0.70	8.17	4.20	7.98	0.36
25	E6_Da	NovelBoundary	0	0.00	21.67	3.85	25.93	8.69	24.98	0.00
26	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	2.14	0.00	0.00
27	I6	Intron	0	0.28	10.54	1.70	8.25	4.35	11.98	0.00
28	I6_AR1	ActiveIntronRegion	0	0.76	31.76	4.74	27.16	12.47	40.00	0.00
29	I6_SR2	SilentIntronRegion	0	0.65	22.98	5.31	23.08	6.12	27.33	0.00
30	E7_Aa	NovelBoundary	0	1.03	12.64	0.62	10.92	8.41	2.65	0.00
31	ER7a	ExonRegion	0	0.00	4.13	1.52	4.20	8.04	7.54	0.00
32	E7_Da	NovelBoundary	0	1.00	16.68	1.39	15.66	5.03	9.81	0.00
33	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER8a	ExonRegion	0	6.01	3.79	5.85	2.23	4.57	1.14	0.60
36	E8a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.09	0.00	0.00
38	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.90	0.00	0.00
39	ER10a	ExonRegion	0	0.54	0.03	0.00	0.03	3.44	0.00	0.00
40	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E11_Ab	NovelBoundary	0	17.19	3.18	8.64	1.68	4.17	4.98	3.84
42	ER11a	ExonRegion	0	5.83	1.21	0.99	1.25	2.36	0.00	0.00
43	ER11b	ExonRegion	0	9.22	1.21	2.03	1.25	4.59	0.41	0.00
44	ER11c	ExonRegion	0	17.37	6.81	17.22	6.72	12.45	13.98	0.99
45	E11_Db	KnownBoundary	0	9.96	11.74	20.88	7.40	9.43	11.71	1.73
46	ER11d	ExonRegion	0	20.42	8.40	21.84	10.90	27.40	10.47	2.87
47	IG21	Intergenic	0	21.53	12.90	14.15	12.24	5.76	19.81	0.24
48	IG21_AR1	ActiveIntergenicRegion	0	3.31	0.00	0.97	0.00	22.02	0.00	0.00
49	IG21_AR2	ActiveIntergenicRegion	0	27.08	11.72	22.20	8.02	11.77	8.70	0.16
50	IG21_SR3	SilentIntergenicRegion	0	44.45	15.23	30.29	17.28	9.28	13.24	0.00
51	IG21_AR3	ActiveIntergenicRegion	0	29.33	19.95	15.72	18.44	3.98	32.97	0.33