Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NPAL3	Gene	0	70.20	16.14	21.69	6.90	24.71	2.76	119.41
2	389490	Transcript	0	1.30	3.05	0.18	0.28	0.45	0.15	2.71
3	3912	Transcript	0	3.16	1.02	1.55	0.65	2.16	0.09	5.26
4	339255	Transcript	0	8.21	6.61	1.51	3.45	5.88	2.94	21.63
5	358028	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	389489	Transcript	0	0	0	0	0	0	0	0
7	374399	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	1.69	3.52	0.20	1.12	1.78	0.61	5.13
9	E1_Ad	KnownBoundary	0	153.53	24.59	24.95	8.94	82.64	2.73	133.87
10	ER1b	ExonRegion	0	27.31	5.85	4.74	1.47	17.52	1.45	25.70
11	ER1c	ExonRegion	0	147.60	20.35	22.97	7.27	63.30	2.45	146.39
12	ER1d	ExonRegion	0	146.44	23.30	23.24	8.38	37.73	1.73	158.32
13	E1a_E2a	KnownJunction	0	30.16	7.49	8.02	1.11	7.17	1.15	57.01
14	ER2a	ExonRegion	0	76.11	27.00	17.16	7.67	21.49	2.40	122.87
15	E2a_E3a	KnownJunction	0	0.00	0.00	0.59	0.00	0.00	0.00	0.77
16	E2a_E4a	KnownJunction	0	51.09	18.31	12.83	4.12	15.91	0.00	105.98
17	ER3a	ExonRegion	0	1.86	2.47	1.00	0.00	1.94	0.00	1.07
18	E3a_E4a	KnownJunction	0	1.03	0.00	0.00	0.00	1.96	0.00	0.00
19	ER4a	ExonRegion	0	54.27	16.52	14.47	11.62	16.49	6.54	122.67
20	E4a_E5a	KnownJunction	0	57.26	15.21	16.67	11.73	19.78	7.58	132.06
21	ER5a	ExonRegion	0	66.93	19.10	23.02	10.23	25.72	4.22	155.38
22	E5a_E6a	KnownJunction	0	75.44	25.88	23.83	11.51	20.52	1.21	159.05
23	ER6a	ExonRegion	0	89.16	20.77	32.56	15.96	24.92	2.74	199.51
24	E6a_E7a	KnownJunction	0	74.82	21.88	32.26	13.11	29.30	5.74	229.52
25	ER7a	ExonRegion	0	65.70	33.87	24.86	15.00	27.47	3.54	204.58
26	E7a_E8a	KnownJunction	0	88.54	27.43	27.26	22.92	31.67	0.00	222.61
27	ER8a	ExonRegion	0	72.96	29.82	27.37	19.82	27.68	0.06	234.02
28	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E8a_E10a	KnownJunction	1	75.10	17.18	19.20	20.24	37.60	0.00	247.42
30	E9_Aa	NovelBoundary	0	1595.29	1191.28	1414.17	1208.07	872.55	1184.44	900.69
31	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E9_Da	NovelBoundary	0	429.45	272.07	336.70	219.09	62.52	205.55	288.95
33	ER10a	ExonRegion	0	79.84	32.04	23.43	20.71	48.66	2.92	265.72
34	E10a_E11a	KnownJunction	0	1.03	1.08	0.00	0.00	0.00	0.00	0.69
35	E10a_E12a	KnownJunction	0	75.34	27.61	23.73	13.33	37.85	2.49	258.91
36	ER11a	ExonRegion	0	0.75	3.62	0.51	0.00	0.00	0.00	2.40
37	E11a_E12a	KnownJunction	0	1.74	3.99	0.00	0.00	0.00	0.00	2.61
38	ER12a	ExonRegion	0	81.41	31.93	27.25	9.67	46.35	4.06	279.71
39	E12a_E13a	KnownJunction	0	84.25	30.71	20.92	8.18	57.91	1.26	226.29
40	E13_Aa	NovelBoundary	1	36.08	1.50	7.04	0.00	1.18	0.00	0.56
41	ER13a	ExonRegion	0	97.10	33.94	26.93	8.42	57.74	1.82	254.04
42	E13a_E14a	KnownJunction	0	108.62	31.76	30.16	9.40	56.89	1.66	290.24
43	E14_Aa	NovelBoundary	0	1.80	0.00	0.66	0.00	9.20	1.42	0.76
44	ER14a	ExonRegion	0	88.14	30.08	30.99	9.42	39.36	6.43	254.05
45	E14a_E15a	KnownJunction	1	8.81	9.83	5.60	5.04	12.08	1.66	46.22
46	E14a_E16a	KnownJunction	0	65.71	16.47	21.66	6.75	26.05	5.79	160.98
47	ER15a	ExonRegion	1	11.71	10.33	5.26	4.93	22.39	3.75	46.63
48	E15_Da	KnownBoundary	1	17.52	6.91	4.84	7.56	27.32	3.11	54.90
49	ER15b	ExonRegion	0	8.21	6.61	1.51	3.45	5.88	2.94	21.63
50	ER16a	ExonRegion	0	61.05	15.96	25.68	6.29	23.41	4.29	126.92
51	E16_Da	KnownBoundary	0	69.48	12.16	23.75	7.72	15.95	9.67	92.62
52	ER16b	ExonRegion	0	78.74	13.97	24.35	5.94	25.58	2.67	110.95
53	E16_Db	KnownBoundary	0	18.96	4.52	9.10	6.15	4.63	1.37	29.71
54	ER16c	ExonRegion	0	9.75	1.59	4.60	2.60	4.74	0.36	19.19
55	IG12_AR3	ActiveIntergenicRegion	0	2.69	18.65	1.44	9.24	1.80	3.45	0.59
56	IG12_SR3	SilentIntergenicRegion	0	0.00	8.13	0.00	0.80	0.00	1.94	0.00