Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF669	Gene	0	45.95	40.68	95.25	75.38	82.22	47.95	16.26
2	343381	Transcript	1	38.00	40.14	69.72	72.88	49.13	90.99	8.31
3	358785	Transcript	0	0	0	0	0	0	0	0
4	366500	Transcript	0	0	0	0	0	0	0	0
5	366501	Transcript	0	0	0	0	0	0	0	0
6	366502	Transcript	1	442.67	74.32	219.41	119.90	28.02	79.02	120.04
7	ER1a	ExonRegion	0	7.52	11.67	21.55	26.28	26.28	14.71	6.60
8	E1_Ab	KnownBoundary	0	4.77	8.88	18.18	6.61	29.14	12.49	3.30
9	E1_Ac	KnownBoundary	1	14.07	27.51	35.09	69.95	26.88	26.34	11.72
10	ER1b	ExonRegion	0	14.60	24.08	38.12	60.42	46.09	25.41	10.67
11	ER1c	ExonRegion	0	10.86	20.40	26.56	57.82	19.63	26.06	7.06
12	E1_Da	KnownBoundary	0	0.00	7.59	6.58	13.19	0.85	7.34	0.00
13	E1a_E2a	KnownJunction	0	5.12	10.06	12.55	27.06	9.41	14.02	4.17
14	ER1d	ExonRegion	0	3.05	7.90	6.40	14.07	1.46	8.89	0.71
15	E1b_E2a	KnownJunction	0	9.21	5.94	11.74	9.97	2.19	4.56	1.53
16	ER2a	ExonRegion	0	30.15	36.71	68.62	66.27	30.61	60.52	17.24
17	E2_Da	NovelBoundary	1	12.58	0.00	27.73	0.00	1.80	1.10	0.00
18	E2a_E3a	KnownJunction	0	0.00	0.00	0.89	2.98	0.00	0.00	0.00
19	E2b_E3a	KnownJunction	0	38.00	40.14	69.72	72.88	49.13	90.99	8.31
20	E2b_E4a	KnownJunction	0	2.00	2.65	8.64	8.61	2.03	4.48	0.00
21	ER2b	ExonRegion	0	44.19	43.13	85.35	90.40	54.26	90.11	11.97
22	ER3a	ExonRegion	0	64.25	55.51	108.43	96.81	100.47	79.43	13.30
23	E3a_E4a	KnownJunction	0	78.61	83.36	140.34	117.47	114.76	86.86	16.12
24	ER4a	ExonRegion	0	91.11	70.63	187.96	135.03	139.92	92.38	27.19
25	E4_Da	KnownBoundary	0	74.94	70.09	197.20	144.88	145.46	105.48	21.07
26	ER4b	ExonRegion	0	102.17	65.58	215.07	126.01	165.85	77.63	28.96
27	E4_Db	KnownBoundary	0	398.74	265.92	496.42	300.68	322.86	233.77	117.33
28	ER4c	ExonRegion	0	59.80	59.58	131.05	105.85	119.25	56.26	24.61
29	E4_Dc	KnownBoundary	0	6585.33	4538.97	5039.38	3984.97	3829.31	3793.19	3699.70
30	E4c_E5a	KnownJunction	1	879.81	137.01	423.24	211.69	40.60	126.31	237.08
31	ER4d	ExonRegion	0	19.11	10.70	17.82	12.36	54.94	8.78	6.22
32	E4_Dd	NovelBoundary	0	79.79	80.10	70.44	91.22	62.22	117.36	45.20
33	I4	Intron	0	13.18	11.18	39.10	14.99	27.55	17.86	3.93
34	I4_SR1	SilentIntronRegion	0	15.45	14.39	39.71	25.50	35.95	22.58	7.74
35	I4_AR2	ActiveIntronRegion	0	13.54	11.00	42.49	12.37	26.85	17.73	2.84
36	E5_Aa	NovelBoundary	0	1270.00	312.71	857.33	279.12	1144.44	279.87	718.38
37	ER5a	ExonRegion	1	5.54	11.64	15.58	28.11	15.45	31.73	2.99
38	IG22_AR2	ActiveIntergenicRegion	0	0.93	0.00	4.26	2.49	9.11	1.23	0.82
39	IG22_AR1	ActiveIntergenicRegion	0	1.54	0.87	4.84	2.49	9.31	1.23	1.35