Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RAB3GAP2	Gene	0	104.61	71.21	168.32	175.14	157.33	134.64	92.68
2	358951	Transcript	0	61.77	32.80	109.56	89.73	89.12	66.60	50.70
3	237724	Transcript	0	44.61	30.05	81.04	52.28	57.30	33.98	34.15
4	ER1a	ExonRegion	0	2.00	4.32	2.47	7.62	4.12	9.86	3.88
5	E1_Ab	KnownBoundary	0	6.56	14.82	10.94	17.34	11.90	23.77	10.39
6	ER1b	ExonRegion	0	28.32	39.57	58.65	87.95	31.25	56.55	31.94
7	E1a_E2a	KnownJunction	0	34.16	61.55	65.90	136.86	31.49	80.32	49.59
8	I1_AR3	ActiveIntronRegion	0	23.55	3.15	39.12	6.14	6.26	5.43	6.91
9	ER2a	ExonRegion	0	68.12	69.49	143.17	162.16	86.64	92.59	68.59
10	E2a_E3a	KnownJunction	0	92.81	80.89	189.31	184.92	153.90	108.41	77.82
11	ER3a	ExonRegion	0	129.76	123.46	211.97	286.85	136.30	191.08	101.23
12	E3a_E4a	KnownJunction	0	172.72	152.11	253.03	368.28	144.59	268.94	102.01
13	ER4a	ExonRegion	0	167.11	149.56	251.36	369.07	199.46	275.70	137.74
14	E4a_E5a	KnownJunction	0	143.27	128.39	205.15	289.41	172.16	233.08	137.80
15	ER5a	ExonRegion	0	145.30	138.49	193.04	318.03	161.35	227.09	144.94
16	E5a_E6a	KnownJunction	0	115.89	106.77	139.68	265.47	163.72	171.38	107.40
17	ER6a	ExonRegion	0	108.11	133.33	163.11	256.83	188.93	170.01	115.93
18	E6a_E7a	KnownJunction	0	94.58	139.19	165.83	254.03	229.79	173.64	129.61
19	E6a_E8a	NovelJunction	0	0.72	1.00	0.89	9.32	0.00	7.69	0.00
20	ER7a	ExonRegion	0	125.83	138.67	204.08	302.54	218.60	190.03	158.85
21	E7a_E8a	KnownJunction	0	88.14	122.82	171.27	219.28	190.76	154.13	123.81
22	ER8a	ExonRegion	0	134.64	136.85	224.42	274.57	203.34	162.16	148.87
23	E8a_E9a	KnownJunction	0	183.49	154.90	270.48	340.29	300.29	182.05	154.46
24	ER9a	ExonRegion	0	137.02	126.05	229.97	282.97	213.85	163.23	134.01
25	E9a_E10a	KnownJunction	0	124.67	123.74	203.46	260.05	217.07	167.90	129.00
26	E9a_E11a	NovelJunction	0	12.93	3.78	22.73	22.24	3.27	17.58	1.73
27	ER10a	ExonRegion	0	80.89	100.96	152.25	222.06	145.20	110.85	101.98
28	E10a_E11a	KnownJunction	0	85.19	81.07	141.19	229.54	152.84	112.99	87.94
29	ER11a	ExonRegion	0	65.64	92.22	173.96	222.71	151.83	120.93	96.69
30	E11a_E12a	KnownJunction	0	58.70	93.47	162.28	233.42	112.36	134.64	89.94
31	ER12a	ExonRegion	0	95.97	89.67	182.98	253.54	115.97	127.68	104.03
32	E12a_E13a	KnownJunction	0	97.72	77.61	178.29	240.03	134.05	138.53	95.60
33	ER13a	ExonRegion	0	95.29	88.94	189.38	249.59	116.51	144.29	100.70
34	E13a_E14a	KnownJunction	0	122.19	99.54	206.07	297.43	135.94	136.97	100.79
35	ER14a	ExonRegion	0	100.27	73.38	189.81	204.50	117.69	124.45	89.01
36	E14a_E15a	KnownJunction	0	82.80	59.50	181.20	207.79	108.19	121.75	82.42
37	ER15a	ExonRegion	0	88.34	71.93	180.94	186.44	102.47	98.60	81.34
38	E15a_E16a	KnownJunction	0	88.14	85.88	161.77	151.79	81.93	95.41	51.84
39	ER16a	ExonRegion	0	114.66	73.15	200.81	170.86	115.75	102.56	83.95
40	E16a_E17a	KnownJunction	0	149.79	61.24	254.51	214.67	129.12	123.09	100.81
41	ER17a	ExonRegion	0	175.35	73.79	308.49	200.09	185.04	116.79	89.88
42	E17a_E18a	KnownJunction	1	220.49	76.40	357.36	187.17	231.66	114.01	80.87
43	ER18a	ExonRegion	1	239.29	69.35	335.21	191.59	210.50	124.10	84.97
44	E18a_E19a	KnownJunction	1	206.75	70.51	283.33	202.29	206.60	132.31	78.32
45	E18a_E20a	NovelJunction	1	5.59	0.00	6.62	10.21	0.92	5.36	0.00
46	ER19a	ExonRegion	1	215.33	73.80	321.51	207.58	197.24	127.72	94.00
47	E19a_E20a	KnownJunction	0	126.69	70.78	246.45	201.58	158.90	116.26	90.00
48	ER20a	ExonRegion	0	141.55	78.31	249.45	195.47	174.06	120.89	100.82
49	E20_Da	NovelBoundary	1	43.63	0.00	72.93	1.14	0.00	0.00	0.66
50	E20a_E21a	KnownJunction	0	63.09	45.76	114.13	69.65	82.21	45.40	47.12
51	E20b_E21b	KnownJunction	0	46.15	24.46	96.87	82.95	71.37	41.14	32.83
52	ER20b	ExonRegion	0	130.83	68.03	238.78	175.20	165.21	111.87	103.38
53	E21_Ab	NovelBoundary	1	49.47	0.00	87.39	3.82	0.00	1.07	0.89
54	ER21a	ExonRegion	0	26.13	14.34	47.96	34.91	32.39	22.56	21.18
55	ER21b	ExonRegion	0	117.97	79.95	192.63	209.11	155.07	110.14	92.85
56	E21a_E22a	KnownJunction	0	100.21	105.22	152.43	199.63	143.50	121.05	89.79
57	ER22a	ExonRegion	0	112.06	111.96	198.95	209.35	157.16	123.02	110.95
58	E22a_E23a	KnownJunction	0	80.68	116.36	148.70	175.74	150.24	117.33	82.42
59	ER23a	ExonRegion	0	62.76	77.64	110.45	170.97	114.62	92.43	81.44
60	E23a_E24a	KnownJunction	0	49.94	51.18	120.98	138.19	116.83	76.03	68.53
61	ER24a	ExonRegion	0	51.12	73.98	125.70	159.37	109.68	113.95	82.53
62	E24a_E25a	KnownJunction	0	58.90	99.78	167.57	190.86	155.17	132.18	94.40
63	ER25a	ExonRegion	0	95.26	101.70	207.04	203.31	196.19	154.04	122.74
64	E25a_E26a	KnownJunction	0	115.09	114.89	214.78	229.41	214.51	157.31	131.81
65	ER26a	ExonRegion	0	132.67	90.57	247.40	246.06	246.36	172.67	148.18
66	E26_Da	NovelBoundary	1	36.42	16.45	68.23	27.06	6.34	14.93	10.88
67	E26a_E27a	KnownJunction	0	137.37	69.07	269.21	220.17	271.06	167.77	140.61
68	E26a_E28a	NovelJunction	0	10.31	13.08	7.56	7.10	0.95	18.97	2.06
69	I26	Intron	0	23.10	9.34	37.50	17.23	7.37	11.33	8.04
70	I26_AR1	ActiveIntronRegion	0	19.56	12.99	35.34	16.00	7.12	12.76	11.24
71	I26_SR2	SilentIntronRegion	0	31.96	10.74	47.89	22.64	9.72	9.02	7.84
72	I26_AR2	ActiveIntronRegion	0	23.37	8.11	41.67	16.54	6.60	9.67	6.49
73	I26_SR3	SilentIntronRegion	0	29.26	4.26	41.54	19.59	7.82	15.03	5.33
74	I26_AR3	ActiveIntronRegion	1	33.58	7.73	36.49	19.78	7.66	13.34	5.57
75	ER27a	ExonRegion	0	153.30	84.01	268.40	266.18	277.04	178.61	176.09
76	E27a_E28a	KnownJunction	0	150.84	90.51	236.77	291.66	313.03	223.11	167.63
77	E27a_E29a	NovelJunction	1	1.92	0.00	3.15	16.58	3.39	1.29	0.00
78	ER28a	ExonRegion	0	145.20	103.09	261.39	296.39	295.77	190.77	161.87
79	E28a_E29a	KnownJunction	0	120.22	81.65	215.54	250.76	255.24	151.55	112.93
80	ER29a	ExonRegion	0	166.62	104.51	281.96	286.66	277.46	174.60	175.24
81	E29a_E30a	KnownJunction	0	135.39	99.38	211.99	204.59	274.77	121.38	147.16
82	ER30a	ExonRegion	0	117.02	127.98	223.38	257.87	243.44	191.81	165.04
83	E30a_E31a	KnownJunction	0	87.49	103.96	195.12	248.21	185.97	182.56	123.62
84	ER31a	ExonRegion	0	128.29	112.47	218.21	246.67	230.97	193.79	142.84
85	E31_Da	NovelBoundary	0	31.99	6.73	43.28	33.11	20.31	17.80	11.57
86	E31a_E32a	KnownJunction	0	158.77	118.04	258.22	244.47	201.14	202.63	154.01
87	I31_AR1	ActiveIntronRegion	0	23.04	6.77	34.89	12.26	10.33	12.37	11.92
88	I31_AR2	ActiveIntronRegion	0	26.12	13.00	51.98	17.34	14.86	15.49	11.70
89	I31_AR3	ActiveIntronRegion	0	19.71	11.84	37.49	15.90	13.00	5.33	12.85
90	ER32a	ExonRegion	0	143.28	108.50	265.18	277.24	225.87	229.75	136.04
91	E32a_E33a	KnownJunction	0	112.62	102.72	221.58	293.72	255.47	205.50	137.37
92	ER33a	ExonRegion	0	120.61	111.73	223.42	267.55	247.03	226.89	139.40
93	E33a_E34a	KnownJunction	0	67.11	94.31	103.96	209.77	115.36	202.28	98.14
94	ER34a	ExonRegion	0	102.91	102.67	164.29	225.36	207.03	203.08	112.35
95	E34a_E35a	KnownJunction	0	108.60	87.25	135.63	227.00	203.93	172.30	105.03
96	ER35a	ExonRegion	0	149.26	56.15	185.06	155.26	198.37	148.10	89.18
97	E35_Da	KnownBoundary	0	59.50	19.76	104.89	40.83	81.84	68.26	64.81
98	ER35b	ExonRegion	0	68.10	34.39	100.11	93.15	115.79	103.52	62.71
99	IG7	Intergenic	0	2.15	0.00	2.63	2.23	12.15	2.19	7.66
100	IG7_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.99	1.56	7.56	2.45	3.01
101	IG7_SR1	SilentIntergenicRegion	0	2.45	0.00	2.88	2.34	13.07	2.23	8.44