Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NMNAT2	Gene	0	18.65	36.17	34.57	42.08	60.08	6.64	203.09
2	287713	Transcript	0	1.28	0.81	1.13	0.42	12.68	1.45	5.93
3	294868	Transcript	0	0.00	0.00	0.00	0.00	0.21	0.00	0.00
4	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	13.39	1.62	0.24
5	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	17.36	2.73	0.00
6	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.41	0.00	0.00
7	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER3a	ExonRegion	0	0.06	0.25	0.00	0.00	50.11	2.53	0.90
9	E3a_E4a	KnownJunction	0	0.63	1.29	0.00	0.00	87.05	1.50	1.36
10	ER4a	ExonRegion	0	0.77	1.04	0.00	0.00	59.35	1.68	0.33
11	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	42.00	0.00	0.00
12	ER5a	ExonRegion	0	0.01	0.00	0.00	0.00	42.86	1.10	0.26
13	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	41.66	5.63	0.89
14	ER6a	ExonRegion	0	0.07	0.00	0.00	0.00	44.76	2.27	0.24
15	E6a_E7a	KnownJunction	0	0.70	0.00	0.00	0.00	40.39	0.00	0.00
16	ER7a	ExonRegion	0	0.62	0.00	0.00	0.00	42.08	0.97	0.00
17	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	59.85	1.15	0.00
18	ER8a	ExonRegion	0	0.00	0.00	0.00	0.58	60.77	1.55	0.57
19	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	1.41	58.37	1.61	1.52
20	ER9a	ExonRegion	0	0.00	0.00	0.00	0.89	51.25	1.70	4.11
21	E9a_E10a	KnownJunction	0	0.00	0.00	0.79	0.00	49.77	3.32	3.73
22	E10_Aa	NovelBoundary	1	1.75	6.62	4.51	20.32	0.00	1.53	26.70
23	ER10a	ExonRegion	1	1.14	2.70	2.09	16.60	85.02	3.93	27.62
24	E10_Da	NovelBoundary	0	0.77	15.37	10.76	26.98	0.00	0.00	40.07
25	E10a_E11a	KnownJunction	0	0.00	0.00	0.66	0.00	80.06	4.07	13.54
26	I10	Intron	0	2.36	6.22	0.77	8.54	0.00	0.71	13.14
27	I10_SR1	SilentIntronRegion	0	2.39	6.30	0.78	8.66	0.00	0.72	13.33
28	E11_Aa	NovelBoundary	0	2.07	16.05	5.60	7.18	0.00	0.00	48.41
29	ER11a	ExonRegion	0	0.08	0.07	1.00	0.22	75.83	8.89	11.31
30	E11_Da	NovelBoundary	0	1.59	17.13	4.70	13.79	0.00	1.66	18.42
31	E11a_E12a	KnownJunction	0	0.00	0.00	0.89	0.00	49.54	11.68	6.33
32	I11	Intron	1	8.89	22.06	16.20	24.92	0.81	1.90	119.73
33	I11_AR2	ActiveIntronRegion	1	27.53	71.17	49.08	75.08	1.94	6.59	379.84
34	I11_SR4	SilentIntronRegion	1	9.64	18.56	16.86	28.71	0.78	0.69	127.99
35	E12_Aa	NovelBoundary	1	8.46	41.54	26.30	60.20	0.00	5.82	287.89
36	ER12a	ExonRegion	0	24.25	47.04	44.97	54.41	67.77	8.06	263.62
37	ER12b	ExonRegion	0	3.84	2.43	3.39	1.25	7.29	0.00	17.54
38	IG29	Intergenic	0	236.36	323.47	404.16	1276.46	14.95	55.66	4602.51
39	IG29_AR2	ActiveIntergenicRegion	0	63.10	49.94	90.68	43.39	19.89	3.24	270.00
40	IG29_SR1	SilentIntergenicRegion	0	22.01	36.32	51.61	48.25	1.12	3.03	205.01
41	IG29_AR1	ActiveIntergenicRegion	0	626.45	854.35	1051.48	3559.61	36.90	153.41	12760.79