Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	JARID1B	Gene	0	237.62	252.64	202.16	274.82	491.73	248.32	170.51
2	367264	Transcript	0	26.88	16.23	12.25	12.69	20.68	13.45	12.75
3	367265	Transcript	0	0	0	0	0	0	0	0
4	235790	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG19_AR3	ActiveIntergenicRegion	0	6.33	41.16	2.47	8.57	18.13	10.14	13.37
6	ER1a	ExonRegion	0	1.19	0.38	1.29	0.66	1.08	0.65	0.28
7	E1_Ab	KnownBoundary	0	1.00	0.00	2.74	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	0.70	0.00	0.41	0.78	0.00	0.00	0.00
9	E1_Da	KnownBoundary	0	0.72	0.00	0.00	0.00	0.00	0.00	0.00
10	E1a_E1c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1c	ExonRegion	0	0.77	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1d	ExonRegion	0	26.96	81.90	20.50	88.38	38.29	74.79	19.09
14	E1b_E2a	KnownJunction	0	73.57	216.58	75.10	248.32	95.02	255.19	43.04
15	ER2a	ExonRegion	0	144.82	330.16	132.58	319.41	187.44	329.71	87.71
16	E2a_E3a	KnownJunction	0	251.45	377.47	200.31	360.50	269.12	380.77	115.78
17	E2a_E4a	NovelJunction	0	8.11	5.65	4.83	11.87	4.20	8.79	2.16
18	ER3a	ExonRegion	0	447.04	451.98	327.84	434.63	540.68	414.48	180.86
19	E3a_E4a	KnownJunction	0	464.56	498.29	375.47	509.72	590.08	465.16	231.40
20	ER4a	ExonRegion	0	565.15	528.60	410.86	542.04	691.17	440.50	248.92
21	E4_Da	NovelBoundary	1	76.47	38.09	20.68	6.75	14.06	1.13	9.13
22	E4a_E5a	KnownJunction	0	245.73	333.52	222.73	280.77	339.91	275.64	160.96
23	E4a_E7a	NovelJunction	0	5.61	15.95	15.86	16.17	11.20	9.73	2.09
24	I4	Intron	1	56.10	17.08	21.83	2.48	136.50	4.04	7.74
25	I4_SR1	SilentIntronRegion	0	55.89	29.19	21.08	3.12	16.96	4.91	7.64
26	I4_AR2	ActiveIntronRegion	1	56.61	19.55	18.68	1.82	13.34	3.02	8.23
27	I4_AR3	ActiveIntronRegion	0	70.43	13.40	28.50	3.47	17.52	5.42	11.84
28	I4_SR3	SilentIntronRegion	1	62.71	6.41	27.73	1.96	13.72	3.45	7.63
29	I4_AR4	ActiveIntronRegion	1	88.68	6.56	34.42	2.24	2000.83	3.02	6.74
30	E5_Aa	NovelBoundary	1	97.95	22.72	43.87	11.46	23.93	9.22	12.54
31	ER5a	ExonRegion	0	348.07	314.34	234.87	310.23	514.73	263.43	178.09
32	E5a_E6a	KnownJunction	0	20.68	12.03	8.95	11.41	16.81	12.30	9.49
33	E5a_E7a	KnownJunction	0	137.36	188.08	104.52	152.14	302.36	197.14	102.74
34	I5	Intron	1	51.65	8.72	23.33	3.30	13.01	5.77	6.62
35	I5_SR1	SilentIntronRegion	0	51.78	8.74	23.38	3.31	13.04	5.78	6.63
36	ER6a	ExonRegion	0	38.24	19.60	16.73	14.74	33.40	16.23	17.08
37	E6_Da	NovelBoundary	0	685.26	345.68	425.74	252.52	543.24	236.53	255.17
38	E6a_E7a	KnownJunction	0	21.71	17.05	11.05	11.92	11.85	11.82	11.67
39	I6	Intron	1	69.34	6.47	30.36	5.31	10.38	2.28	5.82
40	I6_SR1	SilentIntronRegion	1	69.39	6.47	30.38	5.32	10.39	2.28	5.82
41	ER7a	ExonRegion	0	265.13	222.57	194.20	198.78	457.25	193.51	138.88
42	E7a_E8a	KnownJunction	0	311.43	233.58	235.01	274.65	501.35	191.62	143.20
43	ER8a	ExonRegion	0	387.22	313.42	278.40	298.38	504.90	262.31	197.85
44	E8a_E9a	KnownJunction	0	357.33	279.58	263.67	290.17	589.28	232.84	198.29
45	ER9a	ExonRegion	0	274.39	292.09	229.74	295.77	562.07	195.46	191.99
46	E9a_E10a	KnownJunction	0	279.02	283.55	216.82	267.31	540.31	212.74	176.69
47	E10_Aa	NovelBoundary	1	124.36	1.02	90.48	1.68	2.19	6.65	2.06
48	ER10a	ExonRegion	0	283.62	286.58	229.96	288.27	638.74	187.39	203.42
49	E10a_E11a	KnownJunction	0	270.46	296.34	236.41	309.52	717.98	208.31	184.19
50	ER11a	ExonRegion	0	309.28	298.04	232.06	270.55	594.03	202.81	198.03
51	E11a_E12a	KnownJunction	0	248.81	307.77	213.53	248.34	534.69	195.77	175.42
52	ER12a	ExonRegion	0	289.11	286.16	233.22	274.37	548.29	212.45	190.89
53	E12a_E13a	KnownJunction	0	203.52	251.42	220.30	266.33	426.43	194.89	170.82
54	ER13a	ExonRegion	0	269.00	235.11	227.63	241.96	503.51	170.14	163.27
55	E13a_E14a	KnownJunction	0	199.95	219.08	172.24	212.96	435.49	142.23	139.66
56	ER14a	ExonRegion	0	233.84	259.74	215.60	280.60	474.77	171.61	159.74
57	E14a_E15a	KnownJunction	0	243.71	324.11	219.92	316.97	562.33	201.64	190.52
58	ER15a	ExonRegion	0	321.77	342.13	271.56	391.73	771.95	260.30	229.45
59	E15a_E16a	KnownJunction	0	524.53	374.26	386.06	414.74	963.01	230.59	266.09
60	ER16a	ExonRegion	0	438.92	367.97	357.70	403.04	937.02	269.91	281.93
61	E16a_E17a	KnownJunction	0	391.23	306.59	291.19	310.82	808.97	258.38	190.11
62	ER17a	ExonRegion	0	292.96	313.50	268.23	362.94	728.18	245.25	218.23
63	E17a_E18a	KnownJunction	0	268.41	280.11	259.63	380.03	737.07	237.66	185.42
64	ER18a	ExonRegion	0	269.67	311.24	267.71	378.44	666.14	239.82	209.26
65	E18a_E19a	KnownJunction	0	236.63	334.62	275.42	328.64	639.35	255.72	201.40
66	ER19a	ExonRegion	0	270.76	314.75	276.87	365.73	710.79	221.51	219.67
67	E19a_E20a	KnownJunction	0	262.68	330.05	253.38	342.76	622.36	258.48	219.82
68	ER20a	ExonRegion	0	203.32	318.57	200.31	345.35	563.72	237.76	195.67
69	E20a_E21a	KnownJunction	0	161.59	320.62	167.36	321.92	432.22	253.15	193.76
70	ER21a	ExonRegion	0	168.33	328.64	173.27	338.24	476.66	247.65	190.42
71	E21a_E22a	KnownJunction	0	176.93	335.78	185.72	386.97	498.17	270.54	198.88
72	ER22a	ExonRegion	0	322.97	399.47	298.07	443.44	660.94	353.82	247.83
73	E22a_E23a	KnownJunction	0	347.95	425.12	340.25	463.66	685.18	450.45	277.00
74	ER23a	ExonRegion	0	452.62	397.86	398.23	458.93	783.04	413.73	264.44
75	E23a_E24a	KnownJunction	0	255.54	370.53	282.06	387.43	620.10	356.70	212.13
76	ER24a	ExonRegion	0	319.88	365.29	301.49	432.03	730.97	379.69	257.62
77	E24a_E25a	KnownJunction	0	399.17	447.32	325.09	544.67	1143.54	494.05	315.21
78	ER25a	ExonRegion	0	427.33	474.45	369.80	571.14	1162.32	529.18	381.96
79	E25a_E26a	KnownJunction	0	249.98	403.69	219.54	456.19	842.97	449.22	276.87
80	ER26a	ExonRegion	0	329.96	418.15	310.16	488.97	947.91	492.65	305.26
81	E26a_E27a	KnownJunction	0	261.60	368.06	232.41	447.87	823.93	471.92	218.21
82	ER27a	ExonRegion	0	297.14	383.62	299.11	459.61	873.97	516.73	285.15
83	E27a_E28a	KnownJunction	0	172.29	430.54	170.17	464.34	508.20	546.63	210.28
84	ER28a	ExonRegion	0	230.90	206.01	185.10	220.43	441.56	276.93	169.85
85	IG18_AR3	ActiveIntergenicRegion	0	4.99	4.00	3.40	3.87	28.61	3.18	5.56
86	IG18_SR2	SilentIntergenicRegion	0	5.28	4.54	6.49	6.47	32.39	5.78	5.12
87	IG18_AR2	ActiveIntergenicRegion	0	4.51	2.84	3.25	3.61	20.88	5.64	4.22