Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CAMTA1	Gene	0	26.21	81.97	27.38	72.87	24.00	49.51	11.82
2	377565	Transcript	0	127.89	177.97	77.32	151.32	274.16	185.09	92.29
3	303635	Transcript	1	29.41	72.49	34.13	67.08	16.33	44.37	5.44
4	303646	Transcript	1	15.07	96.78	15.45	74.28	2.83	35.80	1.81
5	ER1a	ExonRegion	0	75.91	95.39	33.80	96.77	124.24	113.70	43.96
6	E1a_E2a	KnownJunction	0	179.87	260.56	120.84	205.87	424.08	256.47	140.62
7	E1a_E3a	NovelJunction	0	60.53	151.03	70.89	148.05	64.32	194.65	29.74
8	I1_AR1	ActiveIntronRegion	0	10.38	5.64	12.44	6.87	2.64	9.50	1.88
9	ER2a	ExonRegion	0	213.76	413.49	183.20	388.11	271.57	566.06	257.83
10	E2a_E3a	KnownJunction	0	373.85	483.68	347.96	537.30	206.44	853.36	420.57
11	ER3a	ExonRegion	0	391.62	548.64	319.83	527.78	617.35	908.04	332.92
12	E3_Da	NovelBoundary	1	24.62	1.13	7.10	6.64	6.29	7.88	1.55
13	E3a_E4a	KnownJunction	1	8.58	102.12	6.96	27.55	12.77	52.47	6.65
14	E3a_E5a	NovelJunction	0	0.00	5.57	0.00	1.57	0.00	10.08	1.32
15	I3	Intron	0	16.81	5.75	13.24	4.74	3.95	4.49	1.72
16	I3_SR1	SilentIntronRegion	0	16.92	7.14	14.92	3.01	3.16	3.05	2.14
17	I3_AR1	ActiveIntronRegion	1	20.17	10.82	20.46	5.61	4.11	5.96	1.24
18	I3_AR2	ActiveIntronRegion	0	16.14	4.14	13.16	1.78	4.19	2.40	1.28
19	I3_AR3	ActiveIntronRegion	0	12.70	2.27	14.50	2.49	2.75	2.45	1.35
20	I3_SR2	SilentIntronRegion	1	9.09	2.43	16.82	3.74	2.70	2.45	1.57
21	I3_AR4	ActiveIntronRegion	0	7.57	2.43	14.90	4.28	2.31	2.10	1.35
22	I3_SR3	SilentIntronRegion	0	16.50	5.02	12.20	5.01	4.08	4.64	1.70
23	I3_SR1	SilentIntronRegion	0	13.03	5.57	9.77	6.36	3.35	3.95	1.79
24	I3_AR1	ActiveIntronRegion	1	21.67	4.51	11.94	5.17	3.59	3.72	0.95
25	I3_SR2	SilentIntronRegion	0	12.38	7.05	9.59	6.47	3.43	5.53	1.56
26	I3_AR2	ActiveIntronRegion	0	16.76	12.10	11.60	6.39	3.54	6.42	2.04
27	I3_SR3	SilentIntronRegion	0	14.86	10.47	11.27	8.41	4.94	7.49	1.48
28	I3_AR5	ActiveIntronRegion	0	11.95	4.83	10.08	4.36	2.22	2.83	1.46
29	I3_SR5	SilentIntronRegion	0	11.71	4.59	8.28	3.30	1.72	2.15	0.72
30	I3_AR6	ActiveIntronRegion	0	9.70	4.99	9.73	2.83	1.77	3.59	1.18
31	I3_SR6	SilentIntronRegion	0	13.56	6.66	9.72	4.35	1.77	3.05	0.57
32	I3_AR7	ActiveIntronRegion	1	32.97	89.38	46.46	94.95	168.02	139.55	40.04
33	I3_SR7	SilentIntronRegion	0	10.30	5.01	8.47	5.45	2.78	6.69	2.17
34	I3_AR8	ActiveIntronRegion	0	12.99	16.47	9.47	18.77	5.97	20.21	2.53
35	I3_SR8	SilentIntronRegion	0	13.01	8.78	7.75	8.85	4.95	7.26	2.53
36	I3_AR9	ActiveIntronRegion	0	15.95	8.72	7.95	5.23	6.45	3.46	2.70
37	I3_SR9	SilentIntronRegion	0	16.70	9.07	6.86	8.60	8.71	4.01	3.59
38	I3_AR10	ActiveIntronRegion	0	14.21	10.61	13.90	15.40	8.50	9.71	6.66
39	I3_AR11	ActiveIntronRegion	1	13.26	3.49	4.23	6.86	4.76	9.58	3.92
40	I3_AR12	ActiveIntronRegion	0	18.92	12.60	15.06	9.05	8.81	12.41	7.88
41	I3_SR11	SilentIntronRegion	0	13.98	9.49	9.19	9.88	6.15	10.90	4.82
42	I3_AR13	ActiveIntronRegion	0	17.40	12.72	11.25	15.61	7.16	12.62	5.50
43	I3_SR12	SilentIntronRegion	0	11.79	12.36	13.30	10.40	4.31	11.74	5.93
44	I3_AR14	ActiveIntronRegion	1	55.42	138.78	122.05	318.37	55.26	493.61	45.40
45	ER4a	ExonRegion	1	5.30	111.39	8.75	32.46	14.76	66.44	7.39
46	E4a_E5a	KnownJunction	1	2.14	101.04	5.86	28.55	9.73	62.34	8.28
47	ER5a	ExonRegion	1	3.86	78.93	6.08	33.04	5.79	44.84	4.66
48	E5a_E6b	KnownJunction	1	0.00	20.12	5.83	5.15	3.32	7.88	1.62
49	E5a_E7a	NovelJunction	0	0.00	4.26	1.62	9.29	1.15	7.99	0.00
50	ER6a	ExonRegion	0	0.00	5.67	1.81	2.08	0.81	3.27	0.45
51	ER6b	ExonRegion	0	0.00	12.32	3.89	7.27	1.45	9.50	0.87
52	E6a_E7a	KnownJunction	0	0.00	13.40	2.83	8.56	0.00	5.28	1.66
53	ER7a	ExonRegion	0	0.38	20.85	5.41	11.83	1.35	8.56	0.83
54	E7a_E8a	KnownJunction	0	0.00	16.00	6.71	17.18	4.45	4.98	0.56
55	ER8a	ExonRegion	0	0.74	15.38	3.91	14.86	1.44	7.68	1.13
56	E8a_E9a	KnownJunction	0	0.77	6.52	2.92	11.68	0.00	12.92	0.60
57	ER9a	ExonRegion	0	0.38	6.83	1.15	9.30	0.82	7.81	0.22
58	E9a_E10a	KnownJunction	0	1.03	8.67	0.82	9.62	0.00	4.53	0.00
59	ER10a	ExonRegion	0	0.42	13.47	1.40	9.88	1.04	13.23	0.40
60	E10a_E11a	KnownJunction	0	1.03	20.54	0.63	8.34	0.99	14.12	0.00
61	ER11a	ExonRegion	1	0.67	17.46	0.77	5.75	2.16	11.43	0.01
62	E11a_E12a	KnownJunction	0	0.00	14.37	1.51	5.01	1.06	9.03	0.00
63	I11_AR7	ActiveIntronRegion	0	10.14	4.59	8.86	7.41	5.90	0.65	1.55
64	I11_AR9	ActiveIntronRegion	1	4.73	6.56	12.96	6.50	1.96	0.85	0.32
65	I11_AR10	ActiveIntronRegion	1	5.71	5.28	11.21	4.09	2.64	1.20	0.04
66	ER12a	ExonRegion	1	2.08	61.79	2.92	33.86	2.76	10.78	1.02
67	E12a_E13a	KnownJunction	1	6.59	88.32	6.05	50.09	5.51	9.19	1.10
68	ER13a	ExonRegion	1	8.58	140.62	14.31	95.01	6.86	31.35	3.62
69	E13a_E14a	KnownJunction	1	18.46	162.41	12.76	128.74	9.52	32.70	6.11
70	ER14a	ExonRegion	1	12.22	181.08	21.10	114.97	7.56	31.80	8.10
71	E14a_E15a	KnownJunction	1	7.93	157.65	25.23	79.38	5.33	34.36	5.36
72	ER15a	ExonRegion	0	14.57	153.15	22.11	121.78	10.81	48.28	6.64
73	E15a_E16a	KnownJunction	0	20.55	119.75	11.87	111.62	10.93	46.20	4.04
74	E15a_E17a	NovelJunction	0	0.00	1.37	0.00	8.07	0.00	4.85	0.00
75	ER16a	ExonRegion	1	15.82	145.83	23.88	125.19	9.91	35.31	5.14
76	E16a_E17a	KnownJunction	0	25.32	164.20	28.57	168.78	17.89	60.89	8.79
77	ER17a	ExonRegion	0	21.20	167.69	28.08	155.99	15.90	59.15	8.18
78	E17a_E18a	KnownJunction	0	21.55	156.68	24.42	137.19	8.48	60.67	5.80
79	ER18a	ExonRegion	0	20.46	143.61	26.37	134.85	13.13	46.48	7.24
80	E18a_E19a	KnownJunction	0	15.14	107.82	20.00	97.01	9.68	32.59	5.07
81	ER19a	ExonRegion	0	20.31	112.93	20.34	98.87	10.08	37.94	5.17
82	E19a_E20a	KnownJunction	1	24.92	119.27	30.80	99.07	9.45	45.45	6.08
83	ER20a	ExonRegion	1	29.79	112.34	39.16	97.98	16.96	49.78	5.73
84	E20a_E21a	KnownJunction	1	66.51	131.07	70.60	124.24	39.70	58.05	14.22
85	E21_Aa	NovelBoundary	1	33.75	4.31	30.11	0.00	0.00	4.61	0.00
86	ER21a	ExonRegion	1	50.16	167.57	59.72	156.04	16.21	79.84	8.64
87	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
88	E21a_E23a	KnownJunction	1	30.14	187.89	29.09	146.48	4.84	68.34	3.17
89	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
90	ER22a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
91	ER23a	ExonRegion	1	38.19	178.62	34.73	136.15	7.04	51.01	5.50
92	E23_Da	KnownBoundary	1	48.02	156.89	39.06	124.43	10.24	36.45	7.14
93	ER23b	ExonRegion	1	34.64	78.50	38.36	76.72	15.93	30.35	5.22
94	E23_Db	KnownBoundary	1	13.08	28.85	16.44	23.76	2.95	5.17	1.32
95	ER23c	ExonRegion	1	29.41	72.49	34.13	67.08	16.33	44.37	5.44