Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LILRB3	Gene	0	3.26	0.80	2.42	1.05	3.05	0.90	1.48
2	391750	Transcript	0	4.58	1.30	3.39	1.55	4.91	1.41	1.86
3	407860	Transcript	0	0.04	0.00	0.00	0.00	0.00	0.00	0.02
4	245620	Transcript	0	0	0	0	0	0	0	0
5	346401	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	0.18	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2b	ExonRegion	0	0.77	0.00	0.00	0.00	0.00	0.00	1.16
10	E2_Ac	KnownBoundary	0	1.94	0.00	0.78	0.00	0.00	0.00	1.78
11	ER2c	ExonRegion	0	0.51	0.00	0.00	0.00	0.00	0.00	1.31
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	0.00	0.00	0.18	0.33	0.00	0.00	0.54
16	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER5a	ExonRegion	0	0.38	0.00	0.74	0.00	0.00	0.31	0.68
18	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER6a	ExonRegion	0	0.00	0.00	0.00	0.32	0.00	0.00	0.00
20	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E7a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E8a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER9b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E10_Aa	NovelBoundary	0	3.82	0.00	9.89	1.35	0.00	0.00	5.60
32	ER10a	ExonRegion	0	0.04	0.00	0.00	0.00	0.00	0.00	0.10
33	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER11a	ExonRegion	0	0.31	0.00	0.00	0.00	0.00	0.00	1.25
35	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER16a	ExonRegion	0	1.81	0.00	0.67	0.00	0.04	0.00	0.43
45	E16_Da	KnownBoundary	0	3.81	0.00	0.73	0.00	0.95	0.00	2.15
46	ER16b	ExonRegion	0	4.79	0.00	3.78	0.63	0.45	0.00	1.97
47	E16_Db	KnownBoundary	0	8.38	0.00	4.61	0.00	0.95	0.00	3.81
48	ER16c	ExonRegion	0	13.73	3.91	10.16	4.65	14.72	4.22	5.58