Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TTYH1	Gene	0	4.74	32.87	0.57	0.87	100.36	1.40	2.39
2	301194	Transcript	0	0.00	0.00	0.00	0.00	0.64	0.00	0.02
3	376531	Transcript	0	0.78	3.49	0.52	0.00	23.54	0.00	0.70
4	376530	Transcript	0	5.47	24.70	0.00	0.00	91.64	1.31	4.03
5	391739	Transcript	0	0.30	0.00	0.00	0.48	0.00	0.00	0.81
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	1.28	0.00	0.00
7	ER1b	ExonRegion	0	0.46	5.67	0.00	0.00	6.22	0.00	0.00
8	E1a_E2a	KnownJunction	0	0.83	12.79	0.00	0.00	16.97	0.00	0.00
9	ER2a	ExonRegion	0	1.11	17.76	0.00	0.20	47.11	1.04	0.57
10	E2a_E3a	KnownJunction	0	1.35	32.29	0.00	1.46	60.74	1.61	0.00
11	ER3a	ExonRegion	0	6.52	35.72	0.00	1.57	104.64	0.00	0.75
12	E3a_E4a	KnownJunction	0	8.38	46.05	0.00	1.33	131.03	0.00	0.83
13	ER4a	ExonRegion	0	7.38	41.95	0.00	1.43	144.19	0.33	0.08
14	E4a_E6a	KnownJunction	0	8.36	59.45	0.00	1.68	253.12	2.95	0.00
15	ER5a	ExonRegion	0	0.59	0.00	0.00	0.95	0.00	0.00	1.62
16	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E6_Aa	NovelBoundary	0	1.03	14.08	0.69	0.00	1.11	0.00	5.76
18	ER6a	ExonRegion	0	5.92	55.68	0.78	1.09	217.30	3.06	1.09
19	E6_Da	NovelBoundary	0	5.76	10.61	0.89	0.00	4.24	1.39	3.41
20	E6a_E7a	KnownJunction	0	6.46	54.75	0.88	1.54	199.22	6.65	0.00
21	ER7a	ExonRegion	0	6.36	55.97	0.34	0.44	169.14	2.62	0.00
22	E7a_E8a	KnownJunction	0	3.27	52.78	0.00	0.00	140.81	0.00	0.00
23	E8_Aa	NovelBoundary	0	9.88	10.14	0.89	0.00	0.00	4.53	6.38
24	ER8a	ExonRegion	0	5.03	50.22	0.60	0.69	192.78	3.74	0.00
25	E8a_E9a	KnownJunction	0	6.09	53.07	0.57	1.68	251.21	5.15	0.00
26	ER9a	ExonRegion	0	7.25	46.03	0.15	0.71	222.95	2.69	0.00
27	E9a_E10a	KnownJunction	0	8.71	35.89	0.00	0.00	187.24	1.50	0.00
28	ER10a	ExonRegion	0	8.04	43.38	1.25	0.00	226.34	1.15	0.61
29	E10a_E11a	KnownJunction	0	7.96	55.54	1.62	0.00	219.99	4.66	0.00
30	ER11a	ExonRegion	0	11.67	62.06	0.68	0.00	232.39	4.11	7.22
31	E11a_E12a	KnownJunction	0	8.60	57.38	0.89	0.00	177.14	4.07	2.71
32	E12_Aa	NovelBoundary	0	4.54	10.25	2.17	3.28	2.97	0.00	5.72
33	ER12a	ExonRegion	0	10.60	62.11	2.92	2.95	203.14	2.11	7.20
34	E12a_E13a	KnownJunction	0	10.48	48.00	1.78	3.96	148.21	0.00	7.04
35	E12a_E14b	KnownJunction	0	0.78	3.49	0.52	0.00	23.54	0.00	0.70
36	ER13a	ExonRegion	0	9.42	45.69	1.15	4.61	140.28	1.23	6.50
37	E13a_E14a	KnownJunction	0	0.00	5.94	0.00	4.33	22.48	0.00	1.71
38	E13a_E14b	KnownJunction	0	5.47	24.70	0.00	0.00	91.64	1.31	4.03
39	ER14a	ExonRegion	0	4.23	17.31	1.02	4.99	52.84	0.31	2.70
40	ER14b	ExonRegion	0	5.25	52.01	1.16	2.67	119.88	0.93	6.34
41	E14a_E15a	KnownJunction	0	6.31	40.93	0.00	1.14	137.05	2.92	3.75
42	ER15a	ExonRegion	0	3.21	32.99	0.54	0.45	43.40	2.47	4.37
43	E15_Da	KnownBoundary	0	5.27	5.88	1.78	0.00	0.00	0.00	2.51
44	ER15b	ExonRegion	0	2.16	2.58	0.87	0.00	2.41	0.02	3.11
45	ER15c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.05