Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF546	Gene	0	3.73	2.32	3.23	2.37	8.44	3.42	1.61
2	347077	Transcript	0	2.87	1.46	1.28	1.71	4.50	2.05	0.78
3	392042	Transcript	0	44.95	17.33	64.47	11.34	110.88	18.04	19.94
4	IG7	Intergenic	0	3.51	5.53	5.25	8.14	3.68	8.35	2.08
5	IG7_AR1	ActiveIntergenicRegion	0	12.56	33.29	22.46	45.22	12.14	41.83	12.73
6	IG7_AR6	ActiveIntergenicRegion	0	1.88	1.60	9.04	3.71	2.51	4.12	0.03
7	IG7_AR7	ActiveIntergenicRegion	0	3.33	3.64	9.26	4.99	1.62	3.27	0.67
8	ER1a	ExonRegion	0	0.38	0.00	0.17	0.97	1.08	0.00	0.00
9	E1a_E2a	KnownJunction	0	0.82	0.00	0.00	2.44	3.16	0.00	0.87
10	ER2a	ExonRegion	0	1.40	0.84	0.68	3.26	1.52	0.89	0.05
11	E2_Da	NovelBoundary	0	0.62	0.00	1.41	3.01	0.00	9.22	0.00
12	E2a_E3a	KnownJunction	0	1.70	1.63	0.62	1.68	0.00	1.66	0.00
13	ER3a	ExonRegion	0	2.09	1.74	1.18	2.67	1.60	2.02	0.93
14	E3a_E4a	KnownJunction	0	1.59	1.63	0.00	2.63	2.14	1.02	0.00
15	E4_Aa	NovelBoundary	0	2.75	0.00	0.00	2.98	2.26	9.84	0.00
16	ER4a	ExonRegion	0	3.00	1.61	0.55	2.34	7.40	2.49	0.00
17	E4a_E5a	KnownJunction	0	3.55	4.15	1.21	0.00	5.67	2.57	0.00
18	ER5a	ExonRegion	0	4.03	2.82	2.18	2.14	2.67	1.90	0.40
19	E5a_E6a	KnownJunction	0	3.69	0.00	0.00	0.00	2.35	0.00	0.00
20	ER6a	ExonRegion	0	3.85	0.25	0.80	0.06	5.47	1.90	1.32
21	E6a_E7a	KnownJunction	0	4.97	1.34	2.11	0.00	3.20	0.00	0.89
22	ER7a	ExonRegion	0	2.58	1.02	2.85	1.85	7.72	2.11	1.80
23	E7_Ab	KnownBoundary	0	3.76	2.26	3.56	1.63	6.11	7.66	0.00
24	ER7b	ExonRegion	0	3.51	2.90	3.45	1.69	8.76	6.30	1.70
25	E7_Da	KnownBoundary	0	4.21	1.34	2.18	2.47	10.00	4.66	1.48
26	E7a_E7c	KnownJunction	0	89.91	34.65	128.93	22.68	221.77	36.07	39.88
27	ER7c	ExonRegion	0	4.73	1.54	2.51	3.12	10.18	7.69	2.17
28	E7_Ac	KnownBoundary	0	39.49	14.13	36.16	19.10	62.33	31.01	12.73
29	ER7d	ExonRegion	0	3.95	3.74	3.77	3.50	10.16	2.96	2.01
30	E7_Db	KnownBoundary	0	4.77	2.68	4.99	4.42	11.64	2.55	2.59
31	ER7e	ExonRegion	0	3.19	2.43	1.86	1.85	8.41	4.88	2.48
32	ER7f	ExonRegion	0	3.79	4.86	5.18	2.23	5.67	4.55	2.02
33	ER7g	ExonRegion	0	4.42	2.29	3.83	2.32	9.42	3.65	1.59
34	E7_Dd	NovelBoundary	0	72.70	15.03	97.29	31.94	15.81	89.40	68.29
35	I7	Intron	0	12.89	31.40	19.89	28.75	12.85	36.08	17.17
36	I7_SR2	SilentIntronRegion	0	2.89	3.53	5.06	1.14	8.72	3.98	3.07
37	I7_AR6	ActiveIntronRegion	0	4.29	1.85	4.50	2.74	10.05	2.78	3.41
38	I7_SR4	SilentIntronRegion	0	8.56	12.84	10.75	9.60	12.19	7.73	10.74
39	I7_AR8	ActiveIntronRegion	0	118.46	356.92	192.81	330.00	70.06	417.70	167.04
40	I7_AR9	ActiveIntronRegion	0	4.63	0.43	7.44	0.22	11.53	0.00	4.78
41	I7_AR10	ActiveIntronRegion	0	3.50	1.95	5.22	0.50	8.01	2.39	5.71
42	Ix	Intron	0	3.23	0.87	6.30	1.30	13.93	0.32	3.91
43	Ix_AR4	ActiveIntronRegion	0	4.18	0.89	8.68	1.82	10.01	0.00	3.61
44	Ix_AR6	ActiveIntronRegion	0	4.80	1.19	7.90	1.64	24.89	0.20	5.76
45	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00