Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 AKT2 Gene 0 67.13 74.47 99.36 93.08 122.45 72.78 138.63 2 392038 Transcript 0 227.94 197.25 312.37 261.94 361.98 185.61 324.88 3 311278 Transcript 0 1.79 1.55 0.63 7.12 0.00 6.35 4.77 4 392037 Transcript 0 0.93 0.67 0.90 1.21 6.75 1.20 4.03 5 358335 Transcript 0 3.26 0.33 5.37 0.51 1.54 0.00 1.74 6 ER1a ExonRegion 0 18.47 25.02 31.66 27.99 21.56 30.53 36.20 7 E1a_E2b KnownJunction 0 26.82 59.79 65.89 71.44 13.42 50.06 86.20 8 E1a_E3a NovelJunction 0 0.93 12.51 13.16 12.71 2.14 9.94 4.26 9 I1_SR3 SilentIntronRegion 0 4.94 2.48 4.90 1.12 27.62 0.65 3.93 10 I1_AR3 ActiveIntronRegion 0 2.09 3.63 6.40 1.87 31.32 0.73 8.42 11 I1_AR4 ActiveIntronRegion 0 0.77 2.50 6.51 1.73 31.00 0.68 6.97 12 I1_AR5 ActiveIntronRegion 0 0.77 3.64 6.10 2.49 34.82 1.23 6.94 13 I1_AR1 ActiveIntronRegion 0 4.01 2.00 5.22 1.70 40.94 1.97 7.60 14 I1_SR2 SilentIntronRegion 0 4.17 1.02 2.59 1.41 29.73 1.23 4.79 15 I1_SR3 SilentIntronRegion 0 2.44 0.45 3.11 0.46 25.07 0.46 8.23 16 ER2a ExonRegion 0 0.93 0.67 0.90 1.21 6.75 1.20 4.03 17 E2_Ab KnownBoundary 0 0.68 1.42 1.93 1.30 6.89 0.00 3.20 18 ER2b ExonRegion 0 65.19 110.30 111.22 121.05 80.01 89.43 154.67 19 E2_Ac KnownBoundary 0 60.53 135.56 122.49 139.82 123.31 99.96 159.90 20 ER2c ExonRegion 0 60.13 138.85 116.81 135.07 144.90 107.86 166.72 21 E2a_E3a KnownJunction 0 61.57 126.92 107.17 128.76 158.40 105.03 162.22 22 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER2d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER3a ExonRegion 0 78.12 161.23 148.63 188.69 176.62 164.08 225.33 25 E3a_E4a KnownJunction 0 89.74 190.86 177.52 172.16 141.77 140.54 259.27 26 E4_Aa NovelBoundary 1 32.41 3.84 63.09 2.28 1.18 0.00 2.41 27 ER4a ExonRegion 0 79.18 182.98 173.00 169.82 178.05 142.61 224.47 28 E4a_E5a KnownJunction 0 75.41 184.66 134.39 158.75 156.85 151.66 200.28 29 ER5a ExonRegion 0 77.81 176.50 143.73 158.11 157.34 146.96 201.17 30 E5_Da KnownBoundary 0 78.04 152.74 157.86 167.53 150.44 143.38 209.45 31 E5a_E14b KnownJunction 0 8.18 0.00 14.14 2.06 0.00 0.00 0.00 32 ER5b ExonRegion 0 63.41 162.61 153.58 180.01 179.34 126.96 221.16 33 E5_Db KnownBoundary 1 80.51 169.90 170.72 191.83 170.08 157.05 282.07 34 ER5c ExonRegion 0 78.15 175.97 166.67 228.01 178.11 164.87 293.92 35 E5c_E6a KnownJunction 0 111.24 180.12 208.20 256.77 258.61 177.84 331.04 36 ER6a ExonRegion 0 116.16 189.39 211.74 240.54 258.34 158.38 311.51 37 E6a_E7a KnownJunction 0 111.64 173.89 216.10 241.90 327.05 116.61 320.24 38 E6a_E8a NovelJunction 0 1.55 8.83 4.70 3.06 3.16 6.41 1.63 39 E6a_E9a NovelJunction 0 2.29 2.99 7.86 13.84 1.15 9.49 2.11 40 ER7a ExonRegion 0 141.24 172.73 254.62 224.79 363.12 143.96 379.87 41 E7a_E8a KnownJunction 0 151.03 171.95 240.79 216.73 356.49 169.91 394.56 42 ER8a ExonRegion 0 130.66 184.15 215.38 203.35 269.00 138.48 322.00 43 E8a_E9a KnownJunction 0 155.53 179.88 233.50 198.47 339.50 136.52 314.65 44 ER9a ExonRegion 0 230.14 207.55 331.22 244.00 351.13 189.00 333.97 45 E9a_E10a KnownJunction 0 237.00 221.94 339.92 284.05 433.60 216.22 372.75 46 E9a_E11a KnownJunction 0 1.79 1.55 0.63 7.12 0.00 6.35 4.77 47 ER10a ExonRegion 0 240.30 213.49 338.32 276.64 336.75 197.12 327.50 48 E10a_E11a KnownJunction 0 206.52 156.32 258.88 225.13 315.57 143.49 274.40 49 ER11a ExonRegion 0 167.48 147.37 238.68 192.39 322.92 161.96 294.98 50 E11a_E12a KnownJunction 0 210.43 158.81 274.21 212.58 241.27 204.78 387.29 51 E12_Aa NovelBoundary 0 22.26 27.85 11.55 21.75 3.09 44.14 9.13 52 ER12a ExonRegion 0 161.80 220.52 260.37 296.37 292.30 219.04 419.58 53 E12a_E13a KnownJunction 0 116.70 270.18 221.96 311.20 423.48 267.73 458.42 54 ER13a ExonRegion 0 334.12 300.33 491.70 378.11 591.27 303.70 726.05 55 E13a_E14a KnownJunction 0 296.61 285.78 388.19 410.81 171.17 278.24 660.64 56 ER14a ExonRegion 0 149.92 132.86 191.78 191.44 262.96 150.12 328.65 57 E14_Ab KnownBoundary 0 81.76 42.51 88.35 98.23 76.51 54.94 110.88 58 ER14b ExonRegion 0 73.01 62.32 88.31 86.73 100.68 61.70 142.06 59 E14_Da KnownBoundary 0 19.56 10.01 36.85 2.90 28.68 5.44 21.40 60 E14a_E14c KnownJunction 0 4.87 1.31 7.33 0.00 6.16 0.00 6.95 61 ER14c ExonRegion 0 21.29 6.76 29.51 6.21 37.82 7.50 26.82 62 E14_Ac KnownBoundary 0 28.04 12.35 33.86 15.58 37.28 11.01 53.59 63 ER14d ExonRegion 0 60.45 40.79 75.81 40.82 127.55 31.10 116.27 64 E14_Db KnownBoundary 0 8.51 8.70 10.43 20.26 30.41 7.88 9.92 65 ER14e ExonRegion 0 10.33 16.15 16.54 23.00 23.91 22.27 18.97