Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 DMPK Gene 0 44.32 61.32 50.96 110.91 41.10 88.84 52.18 2 291270 Transcript 0 3.15 7.00 5.34 9.26 4.84 6.28 3.85 3 342805 Transcript 0 0 0 0 0 0 0 0 4 377750 Transcript 0 2.72 8.67 6.31 12.49 6.25 11.27 8.02 5 354227 Transcript 0 1.40 1.21 0.00 2.90 1.11 1.26 1.48 6 348168 Transcript 0 1.74 4.20 6.58 8.80 0.00 14.95 2.45 7 343373 Transcript 1 5.97 17.15 9.11 20.35 5.81 11.44 16.81 8 IG37 Intergenic 0 7.72 15.14 15.83 33.31 7.09 20.03 7.83 9 IG37_AR1 ActiveIntergenicRegion 0 7.72 15.14 15.83 33.31 7.09 20.03 7.83 10 ER1a ExonRegion 0 5.32 10.95 8.36 14.36 5.63 8.49 5.48 11 E1_Ab KnownBoundary 0 10.13 18.63 12.65 28.12 3.25 7.85 10.92 12 ER1b ExonRegion 0 14.50 26.41 19.29 51.20 10.49 39.74 14.30 13 E1a_E2a KnownJunction 0 1.94 3.26 7.14 15.25 2.26 9.70 4.39 14 E1a_E3b KnownJunction 0 19.18 29.29 25.92 63.28 23.84 56.92 18.95 15 I1 Intron 1 21.86 19.19 27.09 15.91 18.55 16.39 27.01 16 I1_AR1 ActiveIntronRegion 1 21.88 19.21 27.12 15.93 18.57 16.41 27.04 17 E2_Aa NovelBoundary 1 32.83 29.29 29.01 8.64 27.69 19.56 34.54 18 ER2a ExonRegion 0 3.52 9.22 7.31 10.80 14.40 10.91 8.76 19 E2_Da NovelBoundary 0 35.15 27.48 46.07 18.53 24.41 19.86 48.11 20 E2a_E3b KnownJunction 0 2.72 13.53 4.48 11.41 2.10 13.19 10.91 21 I2 Intron 1 18.59 15.66 20.63 15.08 22.88 10.09 27.83 22 I2_AR1 ActiveIntronRegion 1 18.67 15.74 20.71 15.14 22.97 10.14 27.97 23 E3_Aa NovelBoundary 0 27.51 18.86 39.12 23.65 28.59 15.70 23.30 24 ER3a ExonRegion 0 18.02 14.34 24.51 15.89 18.57 11.00 20.55 25 E3_Ab KnownBoundary 0 19.16 11.72 20.26 16.69 17.52 6.78 17.14 26 ER3b ExonRegion 0 36.84 57.78 56.44 120.78 55.00 91.40 61.25 27 E3a_E4a KnownJunction 0 45.83 63.13 53.52 139.30 48.78 85.41 61.74 28 ER4a ExonRegion 0 47.21 72.78 58.70 147.36 54.46 99.04 69.52 29 E4a_E5a KnownJunction 0 38.24 67.62 60.84 151.30 72.04 105.78 78.44 30 ER5a ExonRegion 0 32.40 76.73 49.89 160.90 61.68 100.25 82.60 31 E5a_E6a KnownJunction 0 46.78 87.09 57.64 166.69 84.17 80.37 94.42 32 ER6a ExonRegion 0 52.69 84.40 71.33 175.95 64.69 112.20 92.88 33 E6a_E7a KnownJunction 0 57.63 82.41 48.73 188.77 60.95 123.65 108.70 34 ER7a ExonRegion 0 51.29 69.54 57.35 168.35 61.70 94.06 84.00 35 E7a_E8a KnownJunction 0 41.47 58.56 43.99 126.49 42.86 103.77 63.12 36 ER8a ExonRegion 0 38.94 59.94 54.65 132.98 47.23 100.77 65.20 37 E8a_E9a KnownJunction 0 68.28 60.29 60.60 95.79 44.54 98.27 75.61 38 E8a_E10a NovelJunction 1 0.75 0.00 2.82 22.68 1.11 15.92 5.25 39 ER9a ExonRegion 0 56.16 88.81 67.71 140.48 59.15 102.65 81.79 40 E9_Da NovelBoundary 0 29.01 41.27 23.51 75.91 11.43 42.40 34.84 41 E9a_E10a KnownJunction 1 9.10 34.31 18.29 47.82 17.43 23.32 33.31 42 E9b_E10a KnownJunction 0 34.00 61.29 35.47 113.57 23.77 62.20 37.59 43 ER9b ExonRegion 0 33.86 63.09 32.83 109.65 21.92 63.59 41.87 44 ER10a ExonRegion 0 49.53 96.02 63.22 127.67 57.10 96.90 73.48 45 E10a_E11a KnownJunction 0 33.86 89.19 61.84 147.75 63.35 96.96 72.83 46 I10 Intron 0 13.03 5.93 12.61 5.92 3.96 5.51 4.95 47 I10_AR1 ActiveIntronRegion 0 14.13 7.29 12.52 6.74 4.40 5.84 5.29 48 E11_Aa NovelBoundary 1 20.48 5.31 8.97 5.80 1.13 7.50 3.67 49 ER11a ExonRegion 0 49.43 77.60 65.25 155.25 61.43 128.85 76.81 50 E11a_E12a KnownJunction 0 32.19 59.08 43.82 98.26 42.39 75.84 60.48 51 E12_Aa NovelBoundary 0 10.46 24.59 12.00 60.71 6.85 30.98 5.89 52 ER12a ExonRegion 0 33.35 98.78 49.61 150.10 44.03 116.97 61.72 53 E12a_E13a KnownJunction 0 38.25 117.64 59.75 169.32 47.49 124.97 72.29 54 ER13a ExonRegion 0 28.57 91.65 43.75 120.61 42.04 76.99 52.65 55 E13a_E14a KnownJunction 0 29.66 73.48 23.05 57.87 35.41 35.35 51.66 56 E13a_E15a KnownJunction 0 1.40 1.21 0.00 2.90 1.11 1.26 1.48 57 E13a_E16a NovelJunction 1 2.77 30.71 26.61 97.26 1.18 82.81 13.87 58 ER14a ExonRegion 0 18.49 45.62 18.81 38.36 31.12 40.77 38.16 59 E14_Da NovelBoundary 1 12.58 16.47 19.54 2.25 19.94 3.75 5.93 60 E14a_E15a KnownJunction 0 8.09 10.96 9.11 12.19 20.06 16.91 19.68 61 E14a_E16a KnownJunction 0 1.74 4.20 6.58 8.80 0.00 14.95 2.45 62 E15a_E15b KnownJunction 0 2.94 6.15 1.62 0.00 0.00 3.00 3.01 63 ER15a ExonRegion 0 12.29 22.92 10.88 20.28 17.22 22.07 23.48 64 ER15b ExonRegion 0 10.60 20.65 12.06 24.94 12.63 16.92 22.53 65 ER15c ExonRegion 0 12.13 25.40 11.75 23.54 10.40 19.69 21.97 66 E15_Db KnownBoundary 0 6.54 15.87 12.32 13.76 2.14 2.87 13.69 67 E15b_E15c KnownJunction 0 5.89 10.98 7.40 13.22 0.00 8.01 14.12 68 E15_Ac KnownBoundary 1 4.29 19.62 8.16 9.92 8.05 11.71 13.77 69 ER15d ExonRegion 0 12.55 32.60 12.98 30.55 15.93 22.27 24.85 70 ER15e ExonRegion 0 14.26 33.75 15.33 32.97 20.12 24.41 28.19 71 E15c_E16a KnownJunction 0 18.06 38.25 15.66 29.96 33.98 25.70 28.76 72 ER16a ExonRegion 0 23.27 48.38 30.09 82.91 21.23 74.46 28.34 73 E16_Da KnownBoundary 0 4.46 13.37 4.41 24.44 8.25 22.19 1.15 74 E16a_E16b KnownJunction 0 44.18 54.09 45.58 99.94 36.19 99.13 52.04 75 ER16b ExonRegion 0 0.97 3.05 2.32 4.17 4.05 4.08 2.22 76 E16_Ab KnownBoundary 0 10.97 30.97 22.46 46.57 14.68 50.97 20.90 77 ER16c ExonRegion 1 112.70 83.62 100.50 164.76 61.78 165.72 67.54 78 IG36 Intergenic 0 13.86 4.72 5.29 2.12 11.99 2.67 3.19 79 IG36_AR1 ActiveIntergenicRegion 0 13.90 4.73 5.30 2.12 12.03 2.68 3.20