Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KIAA1683	Gene	0	47.16	60.68	12.31	47.45	0.85	147.46	1.06
2	359737	Transcript	0	4.11	6.66	1.92	6.90	0.51	31.02	0.00
3	358422	Transcript	0	8.25	0.00	1.93	0.00	0.00	0.00	0.00
4	392413	Transcript	0	13.17	24.20	3.53	16.79	0.11	39.75	0.37
5	392412	Transcript	0	25.72	28.38	6.75	21.05	0.55	61.21	0.98
6	IG14	Intergenic	0	83.22	340.73	82.87	243.59	18.17	459.45	13.56
7	IG14_AR2	ActiveIntergenicRegion	0	194.92	867.72	154.87	521.68	47.14	916.03	29.72
8	IG14_SR1	SilentIntergenicRegion	0	18.22	32.98	42.02	83.30	1.23	198.83	4.28
9	IG14_AR1	ActiveIntergenicRegion	0	8.96	11.59	14.25	28.41	0.45	55.66	0.45
10	ER1a	ExonRegion	0	0.10	0.48	0.00	0.00	0.00	1.12	0.00
11	I1	Intron	1	17.93	11.05	15.72	31.47	0.79	94.34	1.15
12	I1_SR1	SilentIntronRegion	1	19.17	11.67	17.46	33.72	0.84	98.87	1.29
13	I1_SR2	SilentIntronRegion	1	7.97	6.16	1.16	13.36	0.35	59.88	0.00
14	E2_Aa	NovelBoundary	0	15.56	30.92	7.00	32.97	0.00	134.32	0.00
15	ER2a	ExonRegion	0	12.39	21.35	6.20	20.44	2.03	97.47	0.00
16	E2_Da	NovelBoundary	1	57.30	35.26	16.71	58.03	3.09	197.22	0.73
17	E2a_E3b	KnownJunction	0	3.94	4.81	1.48	5.61	0.00	21.57	0.00
18	I2	Intron	1	10.71	16.24	5.24	35.39	0.81	114.18	0.17
19	I2_SR1	SilentIntronRegion	1	10.43	15.73	5.02	37.24	1.03	121.45	0.23
20	I2_SR2	SilentIntronRegion	1	11.57	14.53	6.31	31.39	0.35	90.44	0.00
21	I2_AR2	ActiveIntronRegion	1	12.00	21.62	5.61	30.36	0.01	101.31	0.00
22	E3_Aa	NovelBoundary	0	11.90	13.87	0.00	12.41	0.00	55.50	0.00
23	E3_Ab	NovelBoundary	0	9.78	11.82	5.58	21.16	1.18	38.62	0.00
24	ER3a	ExonRegion	0	1.12	4.31	1.29	3.97	0.00	12.59	0.00
25	ER3b	ExonRegion	0	38.23	65.66	12.97	60.93	0.70	210.14	0.98
26	E3_Da	KnownBoundary	0	50.69	42.06	10.27	45.08	0.00	173.02	0.00
27	E3a_E6c	KnownJunction	0	16.51	0.00	3.87	0.00	0.00	0.00	0.00
28	ER3c	ExonRegion	0	47.85	59.08	11.94	53.92	0.76	142.78	0.82
29	E3_Db	KnownBoundary	0	24.92	39.67	7.08	23.16	0.00	78.26	0.00
30	E3b_E6b	KnownJunction	0	0.00	0.00	0.00	1.54	0.00	3.94	0.00
31	ER3d	ExonRegion	0	24.33	46.89	7.05	33.58	0.22	77.15	0.73
32	E3_Dc	NovelBoundary	0	22.08	34.78	10.66	24.27	1.15	77.10	0.59
33	E3c_E6b	KnownJunction	0	2.00	1.50	0.00	0.00	0.00	2.36	0.00
34	I3	Intron	0	54.76	63.78	14.21	44.27	0.90	122.22	1.12
35	I3_SR1	SilentIntronRegion	0	43.99	57.02	11.54	36.34	0.62	111.10	1.22
36	I3_AR1	ActiveIntronRegion	0	94.34	93.58	24.28	74.31	1.69	176.86	0.98
37	I3_SR2	SilentIntronRegion	0	35.08	39.37	8.69	27.56	0.99	68.23	0.72
38	E4_Aa	NovelBoundary	0	102.18	242.59	34.17	145.99	0.00	468.14	4.92
39	ER4a	ExonRegion	0	16.61	19.31	4.09	20.58	0.84	47.58	1.61
40	E4_Da	NovelBoundary	0	75.84	104.22	28.50	85.45	1.18	256.96	0.70
41	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E5_Aa	NovelBoundary	0	55.74	106.35	26.36	66.73	1.11	156.70	2.62
43	ER5a	ExonRegion	0	42.20	47.16	12.21	34.31	0.74	94.75	1.83
44	E5_Da	NovelBoundary	0	90.53	94.94	24.47	73.88	0.00	196.63	2.67
45	E5a_E6a	KnownJunction	0	1.03	0.00	0.00	0.00	0.00	3.16	0.00
46	E6_Aa	NovelBoundary	0	56.18	72.40	13.54	42.07	0.00	138.39	0.77
47	ER6a	ExonRegion	0	68.74	75.41	17.43	50.33	1.15	160.55	1.45
48	E6_Ab	KnownBoundary	0	40.46	37.28	9.15	22.30	0.00	115.16	0.00
49	ER6b	ExonRegion	0	25.22	37.90	3.30	31.22	0.79	103.14	0.93
50	E6_Ac	KnownBoundary	1	29.99	44.48	0.53	42.80	1.15	108.97	0.60
51	ER6c	ExonRegion	0	25.45	49.94	3.90	38.38	0.38	115.87	0.32
52	E6_Da	KnownBoundary	0	28.56	45.24	5.33	31.91	0.00	137.97	0.83
53	E6a_E6d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	ER6d	ExonRegion	0	25.05	32.80	4.23	28.44	0.80	121.43	0.20
55	E6_Ad	KnownBoundary	0	17.12	29.58	2.93	23.46	0.97	130.92	0.00
56	ER6e	ExonRegion	1	15.12	19.31	3.68	17.53	0.12	100.77	0.00
57	ER6f	ExonRegion	1	8.73	6.52	2.74	7.26	0.00	38.79	0.00
58	IG13	Intergenic	0	10.52	7.10	2.56	12.16	0.24	55.12	0.20
59	IG13_SR7	SilentIntergenicRegion	0	22.47	6.32	4.43	13.13	0.25	77.96	0.31
60	IG13_SR5	SilentIntergenicRegion	0	15.72	8.60	2.61	15.58	0.00	62.93	0.00
61	IG13_AR6	ActiveIntergenicRegion	0	3.18	5.36	0.44	6.49	0.50	28.39	0.61
62	IG13_SR4	SilentIntergenicRegion	0	12.16	8.53	3.58	12.84	0.20	57.56	0.10
63	IG13_AR5	ActiveIntergenicRegion	0	21.52	7.29	3.39	38.24	0.00	147.73	0.67
64	IG13_AR4	ActiveIntergenicRegion	0	22.48	9.84	3.39	42.83	0.00	164.04	0.67
65	IG13_AR3	ActiveIntergenicRegion	0	10.18	7.57	1.38	19.43	0.28	76.38	0.05
66	IG13_SR3	SilentIntergenicRegion	0	2.36	2.68	0.59	5.01	0.10	12.82	0.25
67	IG13_AR2	ActiveIntergenicRegion	0	5.24	5.50	1.11	10.90	0.62	45.12	0.85
68	IG13_SR1	SilentIntergenicRegion	0	4.59	5.71	1.93	6.05	0.18	48.50	0.00