Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	WDR62	Gene	0	2.77	5.04	2.57	4.11	99.86	2.19	4.59
2	378860	Transcript	0	0.00	0.00	0.00	0.00	0.13	0.00	0.00
3	388999	Transcript	0	0.00	0.00	0.00	0.00	1.84	0.00	0.00
4	270301	Transcript	0	0	0	0	0	0	0	0
5	401500	Transcript	0	1.61	1.52	0.99	1.56	78.08	0.00	4.96
6	221214	Transcript	0	0.12	0.25	0.11	0.34	1.49	0.08	0.09
7	ER1a	ExonRegion	0	0.83	0.00	0.57	0.44	6.53	0.70	0.70
8	E1a_E2a	KnownJunction	0	3.91	0.00	0.00	3.14	48.39	0.00	2.58
9	ER2a	ExonRegion	0	2.75	0.83	2.45	2.60	89.14	1.23	2.60
10	E2a_E3a	KnownJunction	0	3.42	1.23	3.28	3.17	67.66	1.26	0.89
11	ER3a	ExonRegion	0	4.76	2.08	3.13	3.50	82.59	1.17	2.98
12	E3a_E4a	KnownJunction	0	5.47	2.63	2.77	2.38	91.91	0.00	5.20
13	ER4a	ExonRegion	0	4.29	1.17	2.21	2.45	93.83	0.91	5.63
14	E4a_E5a	KnownJunction	0	4.01	0.00	0.73	5.45	89.03	1.66	2.95
15	ER5a	ExonRegion	0	5.65	2.69	3.22	4.32	143.95	0.24	4.73
16	E5a_E6a	KnownJunction	0	6.08	3.26	1.48	1.52	152.26	0.00	6.55
17	ER6a	ExonRegion	0	5.13	3.71	2.40	5.11	135.90	0.00	4.57
18	E6a_E7a	KnownJunction	0	3.02	1.63	1.78	6.50	118.08	0.00	1.53
19	ER7a	ExonRegion	0	2.88	3.43	1.60	3.20	110.99	0.51	2.59
20	E7a_E8a	KnownJunction	0	1.94	1.63	1.25	1.06	90.02	0.00	4.66
21	ER8a	ExonRegion	0	1.42	3.55	2.16	1.11	80.52	0.58	3.08
22	E8a_E9a	KnownJunction	0	1.69	1.58	0.70	0.00	33.50	0.00	2.89
23	ER9a	ExonRegion	0	1.95	3.52	3.19	3.39	117.54	1.06	4.42
24	E9a_E11a	KnownJunction	0	2.40	1.02	2.85	1.25	114.96	1.15	4.73
25	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.13	0.00	0.00
26	ER11a	ExonRegion	0	2.49	4.18	2.83	5.29	128.23	1.92	4.39
27	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	1.98	0.00	0.00
28	E11a_E13a	KnownJunction	0	2.04	4.10	2.03	3.87	124.67	0.00	4.76
29	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	1.70	0.00	0.00
30	ER13a	ExonRegion	0	1.39	2.71	1.65	6.09	140.60	1.13	3.83
31	E13_Ab	KnownBoundary	0	0.00	2.76	1.34	5.85	126.49	2.89	2.84
32	ER13b	ExonRegion	0	1.85	4.13	1.54	5.29	93.05	3.50	2.65
33	E13_Da	KnownBoundary	0	0.00	3.26	0.79	0.00	0.00	1.66	0.00
34	E13a_E14a	KnownJunction	0	4.17	5.65	0.79	4.52	73.95	0.00	0.89
35	ER13c	ExonRegion	0	0.00	1.54	0.30	0.00	0.72	0.47	0.00
36	E13b_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER14a	ExonRegion	0	1.26	5.26	0.99	2.44	109.07	0.97	3.86
38	E14a_E15a	KnownJunction	0	0.00	2.39	1.48	1.49	112.89	2.79	6.11
39	ER15a	ExonRegion	0	3.04	8.45	3.19	4.30	121.66	4.85	8.29
40	E15a_E16a	KnownJunction	0	2.20	8.38	2.92	1.06	123.89	5.41	6.91
41	ER16a	ExonRegion	0	3.16	8.75	2.04	3.17	165.23	1.95	6.15
42	E16a_E17a	KnownJunction	0	4.64	6.70	1.09	5.85	173.89	0.00	10.72
43	ER17a	ExonRegion	0	5.47	9.91	4.00	7.01	218.05	5.96	10.16
44	E17a_E18a	KnownJunction	0	7.41	12.56	3.99	7.21	189.40	1.34	3.77
45	ER18a	ExonRegion	0	6.01	8.92	4.05	4.94	200.10	1.76	7.27
46	E18a_E19a	KnownJunction	0	4.96	2.21	4.20	4.31	227.99	1.31	8.07
47	ER19a	ExonRegion	0	5.45	3.10	5.07	3.56	188.88	1.47	5.19
48	E19_Da	KnownBoundary	0	1.03	0.00	0.89	0.00	6.52	0.00	0.00
49	E19a_E19b	KnownJunction	0	2.50	2.63	1.75	6.26	169.72	0.00	3.94
50	ER19b	ExonRegion	0	0.78	0.03	0.89	0.04	7.86	0.00	0.04
51	E19_Ab	KnownBoundary	0	1.00	0.00	1.35	0.00	6.27	0.00	0.00
52	ER19c	ExonRegion	0	4.00	2.47	1.24	2.04	152.30	0.00	3.66
53	E19b_E20a	KnownJunction	0	4.66	1.63	1.35	0.00	122.76	0.00	3.71
54	ER20a	ExonRegion	0	3.34	5.45	4.22	2.65	132.37	1.80	5.98
55	E20_Da	KnownBoundary	0	0.00	1.50	0.00	0.00	2.12	0.00	1.40
56	E20a_E21a	KnownJunction	0	1.03	5.86	3.69	1.52	132.05	2.89	3.71
57	ER20b	ExonRegion	0	0.00	0.78	0.00	1.16	1.88	0.00	0.61
58	E20b_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	ER21a	ExonRegion	0	4.91	9.66	4.43	5.16	151.09	4.01	6.15
60	E21a_E22a	KnownJunction	0	3.91	6.36	4.83	5.99	109.34	2.81	6.45
61	E22_Aa	NovelBoundary	0	10.00	1.26	2.60	1.16	2.28	0.00	0.00
62	ER22a	ExonRegion	0	4.13	10.18	2.59	7.39	71.57	1.90	4.89
63	E22a_E23a	KnownJunction	0	2.30	10.14	2.39	8.05	65.26	1.21	2.22
64	E22a_E23b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER23a	ExonRegion	0	2.31	12.15	1.63	7.48	59.28	1.23	3.10
66	ER23b	ExonRegion	0	2.11	9.68	2.87	5.06	101.91	2.49	3.75
67	E23a_E24a	KnownJunction	0	0.95	12.03	1.55	2.71	52.65	0.00	5.06
68	E23a_E24b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	ER24a	ExonRegion	0	0.84	9.49	0.68	2.30	59.73	1.79	4.00
70	E24_Ab	KnownBoundary	0	2.25	4.33	0.59	3.17	67.22	3.91	4.50
71	ER24b	ExonRegion	0	1.20	2.53	0.72	1.33	73.92	4.27	3.65
72	E24a_E25a	KnownJunction	0	1.94	0.00	2.40	0.00	70.82	2.87	1.89
73	ER25a	ExonRegion	0	1.45	2.01	2.91	3.59	90.51	1.45	4.31
74	E25a_E26a	KnownJunction	0	1.99	3.18	0.63	3.33	66.07	1.05	4.67
75	E25a_E27b	KnownJunction	0	0.00	0.00	0.00	0.00	1.06	0.00	0.00
76	ER26a	ExonRegion	0	2.48	3.82	0.89	8.58	89.38	2.49	5.35
77	E26a_E27a	KnownJunction	0	3.40	8.41	2.70	5.31	88.82	0.00	6.02
78	E27_Ab	NovelBoundary	0	1.27	5.65	2.41	2.33	54.20	2.20	4.21
79	ER27a	ExonRegion	0	3.77	9.84	4.00	4.99	97.67	2.33	6.75
80	ER27b	ExonRegion	0	3.19	5.72	3.34	3.30	102.16	4.10	5.14
81	E27a_E28a	KnownJunction	0	0.97	1.37	0.63	0.00	73.61	0.00	4.31
82	E27a_E28b	KnownJunction	0	0.00	1.08	0.00	0.00	17.89	0.00	0.00
83	E28_Ab	NovelBoundary	0	0.83	0.00	2.16	6.72	64.20	2.25	5.14
84	ER28a	ExonRegion	0	2.26	1.67	1.35	3.12	82.55	0.00	5.61
85	ER28b	ExonRegion	0	3.40	7.15	2.94	4.81	165.00	0.12	9.36
86	E28a_E29a	KnownJunction	0	3.87	9.22	4.74	5.04	283.94	0.00	10.23
87	ER29a	ExonRegion	0	4.09	11.50	4.96	8.07	133.39	3.89	9.97
88	E29a_E30a	KnownJunction	0	1.85	9.01	2.49	6.26	94.31	1.39	10.35
89	E29a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
90	ER30a	ExonRegion	0	2.39	7.78	1.55	6.86	114.39	5.85	10.24
91	E30a_E31b	KnownJunction	0	3.89	5.78	0.75	5.39	95.30	7.24	5.73
92	ER31a	ExonRegion	0	0.50	0.37	0.05	2.59	4.83	0.38	0.36
93	ER31b	ExonRegion	0	3.15	7.15	4.53	6.73	126.63	5.64	6.18
94	E31a_E32a	KnownJunction	0	3.19	6.80	0.00	4.06	38.45	1.66	3.74
95	E31a_E32b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
96	ER32a	ExonRegion	0	2.38	6.09	2.41	7.99	54.00	2.75	6.38
97	E32_Ab	KnownBoundary	0	5.42	8.43	3.31	7.04	69.90	5.79	8.79
98	ER32b	ExonRegion	0	4.53	10.34	1.91	7.94	77.80	3.02	6.39
99	E32a_E33a	KnownJunction	0	2.57	10.38	1.48	8.18	49.63	1.61	2.92
100	ER33a	ExonRegion	0	1.99	4.78	1.27	2.83	32.39	0.17	3.31