Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CPAMD8	Gene	0	26.08	59.68	2.68	4.05	12.69	4.94	2.12
2	388925	Transcript	0	1.40	4.87	0.00	0.41	1.38	0.00	0.01
3	291440	Transcript	0	40.79	90.81	3.68	5.77	27.42	9.70	2.24
4	ER1a	ExonRegion	0	0.70	16.99	0.00	1.11	1.07	0.76	0.00
5	E1a_E2a	KnownJunction	0	6.19	44.92	0.00	1.03	0.00	1.15	0.00
6	ER2a	ExonRegion	0	9.71	65.68	1.11	2.33	3.08	3.20	0.00
7	E2a_E3a	KnownJunction	0	11.53	55.25	0.63	1.63	5.62	2.89	0.00
8	E3a_E4a	KnownJunction	0	6.49	49.13	1.65	4.74	6.50	2.47	0.00
9	ER3a	ExonRegion	0	11.43	73.90	1.33	5.42	7.54	2.83	0.00
10	ER4a	ExonRegion	0	7.49	72.53	1.01	6.67	3.54	5.88	0.62
11	E4a_E5a	KnownJunction	0	5.62	68.15	0.89	3.79	10.88	6.08	0.00
12	ER5a	ExonRegion	0	11.86	97.01	1.53	4.73	14.90	5.51	0.76
13	E5a_E6a	KnownJunction	0	11.43	72.17	1.54	4.25	15.54	1.45	0.89
14	E5b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER5b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E6a_E8a	KnownJunction	0	9.40	72.85	1.78	10.48	14.32	13.51	0.89
17	ER6a	ExonRegion	0	16.78	114.94	2.78	8.45	19.39	11.92	1.35
18	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER7a	ExonRegion	0	0.06	0.28	0.00	0.10	0.00	0.00	0.05
20	ER8a	ExonRegion	0	22.42	118.15	4.90	11.15	11.07	12.57	3.42
21	E8a_E9a	KnownJunction	0	28.57	111.86	5.26	10.27	11.00	8.28	4.87
22	ER9a	ExonRegion	0	18.71	77.47	3.89	5.70	17.50	7.07	3.92
23	E9a_E10a	KnownJunction	0	27.67	130.25	5.53	12.43	43.29	13.00	4.99
24	ER10a	ExonRegion	0	25.88	36.47	5.83	2.71	17.94	5.54	2.79
25	E10a_E11a	KnownJunction	0	25.32	94.73	2.03	6.72	10.67	5.25	3.94
26	ER11a	ExonRegion	0	21.12	62.38	2.44	3.17	13.33	2.91	2.88
27	E11a_E12a	KnownJunction	0	25.35	124.05	4.04	9.08	29.51	7.21	1.49
28	ER12a	ExonRegion	0	22.21	71.14	2.32	5.28	25.05	4.40	1.34
29	E12_Da	NovelBoundary	0	1.65	16.55	0.00	0.00	1.18	0.00	0.00
30	E12a_E13a	KnownJunction	0	36.72	90.27	2.77	8.51	46.52	11.15	1.43
31	ER13a	ExonRegion	0	49.80	146.50	4.14	7.87	41.14	13.51	2.82
32	E13a_E14a	KnownJunction	0	44.95	136.35	3.19	7.75	48.04	12.25	2.92
33	E13a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER14a	ExonRegion	0	59.77	117.53	1.31	7.97	41.97	10.04	4.50
35	E14a_E15a	KnownJunction	0	74.04	96.99	3.29	10.51	32.25	14.45	3.11
36	ER15a	ExonRegion	0	50.88	82.36	4.22	8.76	33.82	9.56	4.94
37	E15a_E16a	KnownJunction	0	46.97	71.90	4.10	2.52	35.46	7.45	1.68
38	ER16a	ExonRegion	0	38.15	82.21	5.20	3.09	23.49	8.16	0.96
39	E16a_E17a	KnownJunction	0	62.50	109.63	11.45	3.12	18.95	11.63	2.19
40	ER17a	ExonRegion	0	51.58	84.90	5.03	0.94	30.54	8.78	1.19
41	E17a_E18a	KnownJunction	0	43.91	72.72	1.91	2.38	23.74	5.55	2.32
42	ER18a	ExonRegion	0	38.45	85.89	3.92	3.81	23.09	7.86	2.87
43	E18_Da	NovelBoundary	0	2.70	11.22	0.00	0.00	12.93	1.66	0.00
44	E18a_E19a	KnownJunction	0	19.98	65.99	2.05	4.74	18.93	11.39	2.21
45	E18b_E19a	KnownJunction	0	5.07	16.52	0.00	1.52	3.32	0.00	0.00
46	ER18b	ExonRegion	0	4.69	17.25	0.00	1.25	6.32	0.00	0.00
47	ER19a	ExonRegion	0	25.62	100.99	4.50	4.02	19.16	6.87	3.05
48	E19a_E20a	KnownJunction	0	36.82	117.59	2.86	3.09	14.73	8.23	3.24
49	ER20a	ExonRegion	0	43.39	79.60	3.57	5.05	19.15	11.13	2.49
50	E20_Da	NovelBoundary	0	13.29	64.92	0.70	1.68	19.59	8.66	0.77
51	E20a_E21a	KnownJunction	0	36.67	48.97	1.22	5.47	7.70	9.30	1.62
52	I20_AR1	ActiveIntronRegion	0	10.30	20.39	0.89	1.12	11.77	3.97	0.59
53	ER21a	ExonRegion	0	28.81	56.23	1.96	7.03	8.62	4.46	2.39
54	E21a_E22a	KnownJunction	0	23.38	54.28	1.57	3.36	7.54	1.34	4.53
55	ER22a	ExonRegion	0	28.14	52.78	2.53	4.92	10.23	4.77	2.98
56	E22a_E23a	KnownJunction	0	39.07	69.04	4.18	6.29	5.42	12.49	3.04
57	ER23a	ExonRegion	0	27.29	62.12	2.01	5.75	8.50	7.32	1.61
58	E23a_E24a	KnownJunction	0	20.75	48.50	4.80	8.32	10.97	3.94	0.00
59	ER24a	ExonRegion	0	39.75	73.29	6.63	5.30	15.03	6.55	0.42
60	E24a_E25a	KnownJunction	0	49.39	82.52	5.43	1.46	20.61	8.44	0.89
61	ER25a	ExonRegion	0	29.60	57.44	2.99	3.96	9.37	1.79	1.04
62	E25a_E26a	KnownJunction	0	23.07	52.75	1.51	1.11	1.94	2.47	1.46
63	ER26a	ExonRegion	0	26.39	41.93	3.21	0.89	7.01	1.71	1.30
64	E26a_E27a	KnownJunction	0	15.20	32.42	3.33	2.65	9.15	0.00	1.52
65	ER27a	ExonRegion	0	21.28	44.45	2.62	3.10	7.95	1.65	2.62
66	E27a_E28a	KnownJunction	0	14.25	45.92	2.97	2.63	4.20	2.84	1.68
67	ER28a	ExonRegion	0	19.68	43.87	1.59	3.45	5.15	2.44	1.20
68	E28a_E29a	KnownJunction	0	26.95	46.34	3.85	2.30	6.27	1.23	2.85
69	ER29a	ExonRegion	0	16.39	34.05	2.45	2.18	7.14	4.67	0.64
70	E29a_E30a	KnownJunction	0	13.92	31.29	0.55	2.95	5.44	4.45	1.38
71	ER30a	ExonRegion	0	15.81	36.15	1.20	2.56	7.80	8.37	0.49
72	E30a_E31a	KnownJunction	0	19.08	36.31	2.13	3.87	7.45	11.10	0.00
73	ER31a	ExonRegion	0	23.70	45.38	1.83	4.74	8.60	6.51	0.32
74	E31a_E32a	KnownJunction	0	22.77	43.48	0.59	3.22	10.93	10.88	0.00
75	ER32a	ExonRegion	0	27.46	57.89	2.82	6.18	13.29	5.86	0.81
76	E32a_E33a	KnownJunction	0	37.02	72.88	1.74	7.37	19.02	0.00	2.05
77	ER33a	ExonRegion	0	23.28	53.02	1.94	3.50	10.74	5.98	1.55
78	E33a_E34a	KnownJunction	0	24.75	49.47	2.20	4.09	9.66	3.19	2.01
79	E34_Aa	NovelBoundary	0	10.01	29.19	1.34	5.69	5.51	3.83	0.89
80	ER34a	ExonRegion	0	52.12	79.00	4.34	7.20	16.05	6.14	2.46
81	E34a_E35a	KnownJunction	0	40.81	47.53	1.60	8.10	9.13	4.50	3.93
82	E34a_E36a	NovelJunction	0	0.90	10.80	0.00	1.27	1.18	0.00	0.00
83	ER35a	ExonRegion	0	38.43	60.69	2.63	6.02	10.41	2.74	2.03
84	E35a_E36a	KnownJunction	0	34.73	58.90	5.09	2.98	9.34	0.00	0.89
85	ER36a	ExonRegion	0	31.70	59.00	2.97	3.69	9.30	1.16	1.56
86	E36a_E37a	KnownJunction	0	23.90	38.49	3.00	0.00	10.63	1.34	0.76
87	E36a_E38a	NovelJunction	0	1.67	12.06	0.00	0.00	3.23	1.05	0.00
88	ER37a	ExonRegion	0	24.63	41.80	1.80	0.20	7.53	3.33	0.96
89	E37a_E38a	KnownJunction	0	32.40	52.39	4.81	1.22	4.20	6.49	1.72
90	ER38a	ExonRegion	0	24.49	70.32	3.97	2.26	6.72	5.84	2.09
91	E38a_E39a	KnownJunction	0	17.74	51.60	4.22	2.76	10.49	5.57	1.10
92	ER39a	ExonRegion	0	11.09	46.20	1.55	3.91	4.01	3.55	0.44
93	E39a_E40a	KnownJunction	0	24.18	55.80	0.79	5.69	5.49	5.44	0.66
94	ER40a	ExonRegion	0	12.71	35.17	0.71	3.24	3.02	1.40	0.55
95	E40a_E41a	KnownJunction	0	2.30	13.58	1.47	1.33	0.00	2.92	0.67
96	ER41a	ExonRegion	0	3.40	13.61	0.15	1.15	1.65	1.48	0.49
97	E41a_E42a	KnownJunction	0	4.09	15.50	0.65	4.14	2.01	1.34	0.70
98	ER42a	ExonRegion	0	10.96	30.47	2.01	2.92	3.68	3.86	5.73
99	E42a_E43a	KnownJunction	0	0.65	1.50	0.00	1.65	0.85	0.00	0.00
100	I42	Intron	0	25.56	43.81	2.91	3.13	8.21	3.71	9.31
101	I42_AR1	ActiveIntronRegion	0	25.58	43.86	2.91	3.14	8.22	3.71	9.32
102	E43_Aa	NovelBoundary	0	38.00	40.48	2.36	11.43	4.47	7.24	14.06
103	ER43a	ExonRegion	0	26.97	32.24	3.45	2.32	4.35	3.37	6.87