Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DNMT1	Gene	0	58.79	41.77	158.70	199.09	369.79	97.42	52.65
2	359526	Transcript	0	20.05	14.09	75.68	43.46	61.59	24.48	13.67
3	340748	Transcript	0	70.77	31.34	164.51	205.05	361.40	112.75	41.92
4	IG25_AR1	ActiveIntergenicRegion	0	0.42	2.27	1.07	2.03	0.29	9.38	0.00
5	ER1a	ExonRegion	0	4.28	4.29	14.38	18.16	20.38	8.69	3.34
6	E1a_E2a	KnownJunction	0	3.40	8.28	6.31	18.61	13.92	16.96	4.37
7	ER2a	ExonRegion	0	7.12	22.00	24.35	53.75	32.20	31.18	10.98
8	E2a_E3a	KnownJunction	1	12.43	28.16	36.72	62.80	57.91	42.08	18.14
9	ER3a	ExonRegion	0	31.79	31.23	154.94	155.27	151.89	89.30	37.40
10	E3a_E4a	KnownJunction	0	32.58	32.68	173.54	181.75	226.68	116.50	51.56
11	E3a_E7a	NovelJunction	1	0.00	0.00	0.00	0.00	0.00	9.97	0.00
12	ER4a	ExonRegion	0	70.32	45.40	219.04	243.96	269.17	138.19	54.62
13	E4a_E5a	KnownJunction	0	15.17	10.96	68.14	47.11	49.10	13.72	12.60
14	E4a_E6a	KnownJunction	0	70.77	31.34	164.51	205.05	361.40	112.75	41.92
15	E5_Aa	NovelBoundary	1	32.43	16.52	24.03	3.03	17.22	18.60	16.88
16	ER5a	ExonRegion	0	21.66	14.05	78.27	42.29	60.32	25.62	15.05
17	E5_Da	NovelBoundary	0	103.74	70.25	76.45	75.18	28.31	57.24	51.15
18	E5a_E6a	KnownJunction	0	23.33	17.26	80.62	40.96	75.34	34.09	13.37
19	ER6a	ExonRegion	0	95.28	54.86	233.64	279.80	477.33	135.59	63.78
20	E6a_E7a	KnownJunction	0	74.95	45.90	216.32	230.03	448.29	112.02	50.69
21	ER7a	ExonRegion	0	84.78	51.75	261.18	245.27	357.48	140.06	66.02
22	E7a_E8a	KnownJunction	1	47.95	26.90	150.10	173.90	280.18	130.62	55.12
23	ER8a	ExonRegion	0	68.57	51.54	202.89	233.97	355.64	127.96	65.42
24	E8a_E9a	KnownJunction	0	55.94	53.09	157.64	180.62	347.87	66.79	42.69
25	E8a_E10a	NovelJunction	0	2.07	6.52	4.17	3.36	5.19	10.99	0.00
26	ER9a	ExonRegion	0	82.67	61.49	243.66	227.09	307.88	113.51	68.30
27	E9a_E10a	KnownJunction	0	92.75	51.49	265.06	200.83	392.11	126.55	76.62
28	ER10a	ExonRegion	0	102.75	49.57	313.07	243.80	699.04	114.93	82.49
29	E10a_E11a	KnownJunction	0	81.73	27.03	217.22	200.07	863.44	65.20	51.97
30	ER11a	ExonRegion	0	137.24	39.79	336.15	245.72	555.76	114.21	73.55
31	E11a_E12a	KnownJunction	0	74.60	34.60	249.01	201.83	533.12	120.14	65.49
32	ER12a	ExonRegion	0	99.70	55.85	319.82	225.27	453.91	137.80	75.82
33	E12a_E13a	KnownJunction	0	92.71	51.60	268.75	178.56	311.40	96.37	57.05
34	ER13a	ExonRegion	0	145.11	57.97	344.26	313.47	352.02	169.55	70.85
35	E13a_E14a	KnownJunction	1	188.61	56.27	411.84	332.38	630.10	196.42	86.38
36	ER14a	ExonRegion	0	165.32	52.27	369.35	312.88	425.96	162.99	85.75
37	E14a_E15a	KnownJunction	0	87.94	32.66	232.93	171.11	271.03	70.99	61.05
38	ER15a	ExonRegion	0	90.93	39.80	241.94	243.13	506.25	95.68	70.00
39	E15a_E16a	KnownJunction	0	42.71	26.69	129.59	202.37	483.35	65.74	45.50
40	ER16a	ExonRegion	0	58.19	26.04	163.54	181.92	376.32	52.63	55.77
41	E16a_E17a	KnownJunction	0	50.19	26.85	140.44	149.84	370.71	50.95	53.28
42	ER17a	ExonRegion	0	51.28	33.07	145.10	182.14	402.44	68.95	56.64
43	E17a_E18a	KnownJunction	0	41.42	29.48	137.32	196.76	422.81	67.11	60.66
44	ER18a	ExonRegion	0	59.53	39.31	158.73	200.95	479.13	85.54	66.17
45	E18a_E19a	KnownJunction	0	72.53	42.80	194.78	222.45	671.97	103.96	61.18
46	ER19a	ExonRegion	0	57.30	39.20	181.61	210.74	494.98	84.24	61.83
47	E19a_E20a	KnownJunction	0	49.90	47.66	141.68	215.56	396.09	102.29	58.64
48	ER20a	ExonRegion	0	56.20	42.93	167.26	220.47	439.43	80.28	67.22
49	E20a_E21a	KnownJunction	0	38.82	42.64	108.22	209.28	422.05	63.60	51.62
50	ER21a	ExonRegion	0	41.39	42.66	97.94	173.61	272.27	55.92	45.21
51	E21a_E22a	KnownJunction	0	35.35	29.58	76.13	157.86	225.39	44.78	41.73
52	ER22a	ExonRegion	0	37.50	36.99	123.08	197.44	337.31	71.55	45.88
53	E22a_E23a	KnownJunction	0	50.72	35.31	147.28	227.92	401.65	71.98	54.30
54	ER23a	ExonRegion	0	70.03	40.03	180.41	200.81	495.86	77.81	56.23
55	E23a_E24a	KnownJunction	0	58.97	31.53	180.00	189.99	436.51	46.71	37.58
56	ER24a	ExonRegion	0	77.67	45.56	233.22	233.64	585.45	90.87	65.97
57	E24a_E25a	KnownJunction	0	91.31	51.96	220.50	250.51	704.63	128.18	76.17
58	ER25a	ExonRegion	0	90.91	56.79	231.00	250.40	579.25	102.12	85.84
59	E25a_E26a	KnownJunction	0	80.23	50.65	219.51	242.33	473.60	116.55	76.63
60	ER26a	ExonRegion	0	72.04	47.46	189.69	222.62	501.20	86.78	63.28
61	E26a_E27a	KnownJunction	0	53.07	37.04	157.20	197.06	315.29	67.88	49.93
62	ER27a	ExonRegion	0	53.14	50.47	172.09	231.00	370.39	94.51	51.75
63	E27a_E28a	KnownJunction	0	68.81	61.42	226.58	277.77	481.62	101.36	54.96
64	ER28a	ExonRegion	0	79.35	54.43	210.29	271.49	474.07	124.04	66.39
65	E28a_E29a	KnownJunction	0	84.80	50.31	209.38	280.93	537.20	123.55	62.90
66	ER29a	ExonRegion	0	94.68	62.69	241.58	286.87	509.44	140.82	74.19
67	E29a_E30a	KnownJunction	0	64.99	59.40	220.73	244.12	511.93	117.68	71.87
68	ER30a	ExonRegion	0	44.24	46.40	135.53	169.83	346.72	75.55	53.41
69	E30a_E31a	KnownJunction	0	29.04	46.50	128.90	187.31	297.91	64.43	44.56
70	I30	Intron	0	14.84	7.92	21.51	13.66	33.57	12.54	11.90
71	I30_AR1	ActiveIntronRegion	1	14.87	7.94	21.55	13.69	33.64	12.56	11.93
72	E31_Aa	NovelBoundary	1	19.41	6.07	31.70	9.56	41.33	28.62	12.87
73	ER31a	ExonRegion	0	52.81	46.91	150.19	224.42	337.27	108.67	53.55
74	E31a_E32a	KnownJunction	0	62.75	49.50	142.53	221.77	297.20	137.05	65.58
75	ER32a	ExonRegion	0	46.95	42.31	125.31	188.57	329.67	89.03	50.18
76	E32a_E33a	KnownJunction	0	43.56	32.92	122.10	180.40	309.48	77.85	38.81
77	ER33a	ExonRegion	0	32.54	27.93	94.09	157.85	243.07	73.78	36.38
78	E33a_E34a	KnownJunction	0	30.93	30.19	100.74	182.62	297.06	84.18	37.88
79	E34_Aa	NovelBoundary	1	7.93	8.41	6.34	21.84	16.57	18.68	14.17
80	ER34a	ExonRegion	0	36.79	31.71	104.85	154.34	254.17	87.06	44.22
81	E34a_E35a	KnownJunction	0	31.16	29.84	84.24	143.58	183.04	83.05	38.57
82	ER35a	ExonRegion	0	42.92	37.70	104.89	174.34	323.88	105.08	43.46
83	E35a_E36a	KnownJunction	0	50.00	41.43	127.74	238.70	478.88	144.08	59.86
84	ER36a	ExonRegion	0	48.08	53.52	120.51	229.90	368.95	131.09	57.63
85	E36a_E37a	KnownJunction	0	50.10	57.95	132.77	229.65	522.84	139.60	77.05
86	ER37a	ExonRegion	0	34.75	46.69	95.01	208.83	353.79	131.58	56.73
87	E37a_E38a	KnownJunction	0	30.26	35.10	85.20	199.91	228.13	113.12	62.11
88	ER38a	ExonRegion	0	28.84	33.88	84.34	190.09	312.02	103.90	43.12
89	E38a_E39a	KnownJunction	0	30.93	22.38	82.07	192.81	322.81	95.70	35.54
90	ER39a	ExonRegion	0	42.00	30.62	103.91	180.24	351.68	90.44	45.01
91	E39a_E40a	KnownJunction	0	37.92	23.67	90.72	118.63	267.11	51.48	27.50
92	E39a_E41a	NovelJunction	1	12.77	17.79	33.78	108.12	17.15	86.51	6.66
93	ER40a	ExonRegion	0	57.67	46.42	100.82	158.88	490.77	55.92	37.55
94	E40a_E41a	KnownJunction	0	98.82	54.04	174.47	200.23	886.80	77.18	71.63
95	E41_Aa	NovelBoundary	1	44.95	6.12	88.33	3.90	18.42	1.02	5.63
96	ER41a	ExonRegion	0	90.07	53.14	193.58	221.44	541.81	161.72	54.96