Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TMPRSS9	Gene	0	1.84	1.25	1.40	1.23	1.18	2.38	2.13
2	395264	Transcript	0	0.27	0.05	0.14	0.79	0.68	1.13	0.44
3	332578	Transcript	0	1.05	0.49	0.82	0.79	0.76	1.88	1.25
4	ER1a	ExonRegion	0	0.00	0.64	0.00	0.00	0.29	1.31	0.00
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	0.00	0.00	0.00	0.62	0.19	0.21	0.00
7	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	1.16	1.18	1.42	0.00
8	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	0	0.00	0.00	0.00	0.22	0.73	0.97	0.00
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.97	0.00	0.00
11	ER4a	ExonRegion	0	0.00	0.00	0.68	1.10	0.25	3.01	0.00
12	E4_Ab	KnownBoundary	0	0.00	0.00	0.89	1.65	0.00	5.52	0.00
13	ER4b	ExonRegion	0	0.66	0.51	0.20	1.07	0.29	2.65	0.36
14	E4a_E5a	KnownJunction	0	0.00	1.26	0.00	0.00	0.00	3.06	0.00
15	ER5a	ExonRegion	0	0.02	0.49	0.00	0.00	0.00	2.74	0.00
16	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.66	0.70
17	ER6a	ExonRegion	0	1.02	2.88	0.00	0.00	0.71	2.88	0.00
18	E6a_E7a	KnownJunction	0	0.00	1.63	0.00	0.00	2.07	0.00	0.00
19	ER7a	ExonRegion	0	1.93	0.24	2.29	0.55	1.21	3.65	0.60
20	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.58	0.00
21	ER8a	ExonRegion	0	1.84	1.34	1.03	1.71	0.92	2.02	0.74
22	E8a_E9a	KnownJunction	0	0.00	0.00	0.50	0.00	0.00	2.81	0.00
23	ER9a	ExonRegion	0	3.27	3.37	1.72	1.38	0.57	2.25	1.48
24	E9_Da	NovelBoundary	0	10.73	2.71	0.50	3.17	0.00	3.27	0.00
25	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER10a	ExonRegion	0	3.85	3.44	2.28	1.96	1.01	2.26	4.13
27	E10a_E11a	KnownJunction	0	0.00	0.00	0.89	0.00	0.00	0.00	0.00
28	ER10b	ExonRegion	0	1.34	0.26	0.00	1.46	0.28	0.27	2.20
29	ER11a	ExonRegion	0	0.89	0.54	0.44	2.20	0.69	0.97	1.78
30	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.10	0.00
31	ER12a	ExonRegion	0	3.13	1.33	2.01	2.24	1.96	2.84	2.64
32	E12_Da	NovelBoundary	0	10.68	5.60	4.18	2.28	0.00	0.00	7.24
33	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	0.00	0.00
34	E13_Aa	NovelBoundary	0	8.03	3.81	10.84	8.89	5.79	4.31	6.05
35	ER13a	ExonRegion	0	7.65	4.04	4.89	3.83	3.92	8.71	7.83
36	E13a_E14a	KnownJunction	0	0.92	0.00	0.66	0.00	0.00	4.26	0.00
37	ER14a	ExonRegion	0	2.45	0.70	3.32	0.96	2.91	4.81	6.32
38	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.50	0.00
39	ER15a	ExonRegion	0	0.56	0.00	0.59	1.12	0.47	0.89	1.21
40	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER16a	ExonRegion	0	0.22	1.03	0.51	0.71	0.76	0.00	0.76
42	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.31	0.00
43	ER17a	ExonRegion	0	1.16	0.68	0.62	0.66	0.72	0.73	0.75
44	E17a_E18a	KnownJunction	0	0.75	0.00	0.00	0.00	1.06	3.78	0.00
45	E18_Aa	NovelBoundary	0	7.13	8.49	20.48	5.07	2.10	7.34	19.08
46	ER18a	ExonRegion	0	0.07	0.00	0.00	0.01	0.43	1.10	0.00