Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MED16	Gene	0	88.05	136.89	100.09	78.84	130.87	107.24	137.62
2	325464	Transcript	0	3.22	3.81	3.23	0.92	3.58	0.16	1.21
3	269814	Transcript	0	0.00	2.86	2.60	2.71	0.99	4.48	2.77
4	395808	Transcript	0	0	0	0	0	0	0	0
5	312090	Transcript	0	0.00	0.86	0.01	0.00	0.00	0.01	0.48
6	ER1a	ExonRegion	0	2.71	1.79	2.75	0.46	4.05	0.32	0.85
7	ER1b	ExonRegion	0	89.56	69.30	57.73	60.74	133.23	73.03	110.89
8	E1a_E2a	KnownJunction	0	30.76	37.67	39.72	31.56	18.28	27.71	40.53
9	ER2a	ExonRegion	0	68.76	107.58	76.12	74.89	97.16	97.60	121.50
10	E2a_E3a	KnownJunction	0	62.65	119.80	96.71	69.81	304.90	99.96	144.10
11	ER3a	ExonRegion	0	77.22	147.18	102.02	65.60	133.58	124.01	128.25
12	E3a_E4a	KnownJunction	0	98.80	114.62	116.56	37.39	87.32	76.16	127.02
13	E3a_E5a	NovelJunction	0	0.00	30.16	4.73	27.12	0.00	36.50	7.37
14	E4_Aa	NovelBoundary	1	34.83	0.00	35.12	1.11	0.00	1.66	0.00
15	ER4a	ExonRegion	0	93.65	134.93	115.84	48.36	103.98	76.27	122.64
16	E4a_E5a	KnownJunction	0	119.97	140.58	127.90	48.60	114.80	82.14	140.06
17	ER5a	ExonRegion	0	113.87	176.32	122.72	103.76	181.58	133.41	190.25
18	E5a_E6a	KnownJunction	0	199.91	221.63	201.80	120.15	247.20	144.67	283.56
19	E6_Aa	NovelBoundary	1	76.67	0.00	74.83	1.35	0.00	0.00	0.83
20	ER6a	ExonRegion	0	189.04	260.90	214.03	143.47	273.88	191.86	323.85
21	E6a_E7a	KnownJunction	0	140.43	230.93	176.94	150.82	262.34	147.93	241.08
22	ER7a	ExonRegion	0	120.83	201.49	152.67	117.69	203.16	126.21	206.78
23	E7a_E8a	KnownJunction	0	61.55	167.98	103.45	80.95	144.26	91.98	119.34
24	ER8a	ExonRegion	0	69.33	126.32	92.43	69.61	110.55	88.47	115.09
25	E8a_E9a	KnownJunction	0	87.59	130.99	106.15	90.38	107.20	96.00	146.93
26	E8a_E10a	NovelJunction	0	2.60	5.07	3.12	3.52	8.02	11.23	2.91
27	ER9a	ExonRegion	0	109.80	176.52	133.14	109.97	156.40	117.39	177.90
28	E9a_E10a	KnownJunction	0	82.15	184.11	122.81	116.55	103.65	123.65	163.05
29	ER10a	ExonRegion	0	111.77	151.83	127.61	94.40	191.75	122.56	167.42
30	E10a_E11a	KnownJunction	0	113.56	138.27	128.17	84.09	262.06	117.22	162.93
31	ER11a	ExonRegion	0	132.15	153.66	153.45	94.13	156.36	137.76	177.49
32	E11a_E12a	KnownJunction	0	79.01	143.02	85.66	74.47	109.34	99.94	115.90
33	E11a_E14a	KnownJunction	0	0.00	2.86	2.60	2.71	0.99	4.48	2.77
34	ER12a	ExonRegion	0	113.82	159.59	118.05	82.82	148.50	123.48	160.40
35	E12a_E13a	KnownJunction	0	0.00	1.52	0.00	0.00	0.00	0.00	0.89
36	E12a_E14a	KnownJunction	0	82.15	147.28	77.14	72.85	84.53	89.11	115.80
37	ER13a	ExonRegion	0	0.00	1.04	0.02	0.00	0.00	0.02	0.54
38	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER14a	ExonRegion	0	52.31	110.24	63.17	62.93	92.06	97.18	102.23
40	E14a_E15a	KnownJunction	0	76.69	134.06	85.06	73.09	102.35	109.61	125.83
41	E15_Aa	NovelBoundary	1	24.02	0.00	27.73	0.00	4.01	6.62	0.00
42	ER15a	ExonRegion	0	81.67	135.70	88.59	65.90	104.90	103.22	121.41
43	E15a_E16a	KnownJunction	0	67.74	158.68	74.61	71.74	113.42	122.45	115.57
44	ER16a	ExonRegion	0	53.53	146.16	59.86	74.89	86.55	111.92	91.98
45	E16_Da	KnownBoundary	0	62.72	128.84	74.21	69.27	101.46	108.30	111.24
46	E16a_E16b	KnownJunction	0	3.74	5.83	3.71	1.38	3.11	0.00	1.56
47	ER16b	ExonRegion	0	50.31	107.49	61.20	65.34	79.56	106.23	77.75
48	E16_Ab	KnownBoundary	0	46.95	70.57	48.01	58.08	49.10	92.91	51.18
49	ER16c	ExonRegion	0	33.42	55.60	34.09	37.81	40.24	64.71	32.87