Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C19orf28	Gene	0	70.67	149.25	61.60	111.12	57.80	98.95	101.92
2	355415	Transcript	0	78.54	128.52	46.82	56.56	34.25	59.72	64.06
3	398558	Transcript	1	13.16	21.11	16.48	47.51	17.19	45.90	19.35
4	389395	Transcript	1	5.24	23.78	13.28	43.35	26.23	41.91	27.54
5	ER1a	ExonRegion	0	31.80	95.76	23.86	66.50	20.52	62.17	42.01
6	E1_Da	NovelBoundary	1	5.59	8.91	4.10	10.29	0.00	34.89	3.83
7	E1a_E2a	KnownJunction	0	105.33	245.06	78.43	151.14	85.60	156.22	139.42
8	E1a_E3a	NovelJunction	0	0.00	3.21	0.83	10.02	0.00	7.02	0.79
9	ER2a	ExonRegion	0	116.38	287.33	92.83	177.99	75.22	176.03	163.67
10	E2a_E3a	KnownJunction	0	121.45	277.08	105.48	182.51	117.87	191.99	186.94
11	E2a_E4a	NovelJunction	0	0.00	5.39	1.64	10.76	2.37	15.44	1.55
12	ER3a	ExonRegion	0	96.41	244.24	79.85	151.48	63.90	141.21	136.91
13	E3a_E4a	KnownJunction	0	100.79	173.34	103.12	143.01	116.32	118.62	155.85
14	ER4a	ExonRegion	0	104.89	197.94	102.24	133.33	85.04	124.53	156.89
15	E4a_E5a	KnownJunction	0	130.03	218.76	121.83	146.56	96.82	124.08	184.00
16	E5_Aa	NovelBoundary	0	11.53	40.12	3.94	24.60	1.13	23.34	15.78
17	ER5a	ExonRegion	0	134.65	280.12	150.42	197.56	141.93	162.24	247.02
18	E5a_E6a	KnownJunction	0	141.28	288.07	167.10	202.34	147.93	183.74	253.72
19	ER6a	ExonRegion	0	127.95	313.69	142.82	230.71	127.39	163.65	230.40
20	E6a_E7a	KnownJunction	0	139.41	319.41	138.95	247.48	168.08	168.01	208.98
21	E6a_E8a	NovelJunction	0	16.02	8.51	11.73	18.83	3.16	12.09	35.74
22	ER7a	ExonRegion	0	98.91	271.57	100.00	198.84	112.73	133.67	169.50
23	E7a_E8a	KnownJunction	0	134.72	228.46	108.80	188.42	83.68	125.29	154.54
24	ER8a	ExonRegion	0	127.46	261.31	110.56	192.10	109.62	158.18	187.47
25	E8a_E9a	KnownJunction	0	114.46	244.35	119.29	175.33	108.58	147.56	175.85
26	ER9a	ExonRegion	0	98.07	217.77	83.16	143.47	80.70	132.12	140.71
27	E9_Da	NovelBoundary	1	11.90	10.82	8.19	13.30	7.98	6.54	29.35
28	E9a_E10a	KnownJunction	0	82.46	152.64	46.53	59.68	39.31	62.85	61.40
29	E9a_E11a	KnownJunction	1	0.62	11.09	6.25	21.70	4.54	33.71	2.82
30	E9a_E12a	KnownJunction	1	5.24	23.78	13.28	43.35	26.23	41.91	27.54
31	ER10a	ExonRegion	0	74.62	104.40	47.12	53.45	29.20	56.59	66.73
32	E10_Da	NovelBoundary	0	23.95	20.02	18.52	14.22	15.51	14.42	30.57
33	Ix	Intron	1	10.18	11.39	6.76	10.63	8.24	8.24	20.68
34	Ix_AR1	ActiveIntronRegion	0	10.27	11.50	6.83	10.75	8.33	8.33	20.90
35	Ix	Intron	1	26.07	21.52	23.67	26.86	26.77	18.43	64.97
36	Ix_AR1	ActiveIntronRegion	0	26.26	21.68	23.84	27.05	26.96	18.57	65.44
37	E11_Aa	NovelBoundary	0	39.82	23.62	33.24	32.73	21.97	27.42	68.17
38	ER11a	ExonRegion	0	29.01	33.10	27.34	61.15	36.52	53.66	50.74
39	E11_Da	NovelBoundary	0	28.81	24.43	23.05	18.39	17.64	16.99	44.59
40	E11a_E12a	KnownJunction	1	9.85	19.15	15.84	59.68	10.51	50.33	4.49
41	Ix	Intron	0	36.77	12.20	30.20	10.63	30.86	13.60	56.66
42	Ix_AR3	ActiveIntronRegion	0	68.00	19.72	56.14	16.37	48.13	21.20	84.04
43	Ix_AR2	ActiveIntronRegion	0	11.94	3.16	9.44	4.81	19.34	10.49	19.00
44	Ix_AR1	ActiveIntronRegion	0	12.85	5.67	11.53	8.25	17.54	6.46	37.72
45	Ix	Intron	1	19.53	12.05	14.41	20.46	13.22	15.68	45.18
46	Ix_AR1	ActiveIntronRegion	0	19.63	12.11	14.48	20.54	13.28	15.76	45.39
47	E12_Aa	NovelBoundary	1	29.81	10.46	22.20	16.01	27.66	26.69	99.66
48	ER12a	ExonRegion	0	29.56	52.85	32.67	94.02	49.34	86.86	58.74