Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MBD3	Gene	0	57.88	69.05	132.41	102.91	112.44	134.53	132.95
2	156825	Transcript	1	2.76	6.11	3.89	6.45	8.09	9.34	14.45
3	355664	Transcript	0	83.92	95.52	170.62	88.51	116.46	107.28	139.75
4	IG20_SR2	SilentIntergenicRegion	0	1.14	0.40	1.59	1.24	8.24	0.20	1.32
5	IG20_AR4	ActiveIntergenicRegion	0	0.00	1.21	0.68	0.00	7.98	0.00	1.35
6	ER1a	ExonRegion	0	0.10	0.69	1.00	3.14	0.70	1.60	1.23
7	ER1b	ExonRegion	0	3.71	5.67	8.87	8.68	5.06	15.84	6.90
8	E1a_E2a	KnownJunction	0	5.41	7.25	19.43	15.23	8.88	30.18	9.06
9	I1	Intron	0	22.90	7.52	29.15	11.10	22.58	7.09	32.61
10	I1_AR1	ActiveIntronRegion	0	17.02	7.07	24.49	10.63	15.79	8.25	25.56
11	I1_SR2	SilentIntronRegion	1	30.86	16.53	48.84	24.74	40.62	19.91	62.51
12	I1_AR2	ActiveIntronRegion	0	28.30	9.37	35.86	11.07	27.30	8.68	32.76
13	I1_AR3	ActiveIntronRegion	1	25.07	9.08	30.84	10.06	25.64	4.51	40.43
14	I1_AR4	ActiveIntronRegion	1	34.33	6.94	39.36	12.95	42.76	9.26	57.82
15	I1_AR6	ActiveIntronRegion	0	23.04	8.22	28.62	12.27	17.16	4.39	27.31
16	ER2a	ExonRegion	0	53.27	56.08	111.36	83.99	88.67	105.63	107.55
17	E2a_E3a	KnownJunction	0	102.46	79.63	244.97	134.53	169.00	144.85	186.67
18	ER3a	ExonRegion	0	85.60	96.87	223.54	129.40	133.70	160.88	201.08
19	E3a_E4a	KnownJunction	0	102.91	92.74	228.99	123.81	104.94	129.82	213.41
20	E3a_E5a	NovelJunction	1	1.70	4.28	1.94	11.59	0.00	26.50	0.00
21	ER4a	ExonRegion	0	104.78	89.79	280.16	119.27	180.95	134.78	234.16
22	E4a_E5a	KnownJunction	0	91.96	88.64	246.67	113.76	178.68	116.79	207.28
23	E4a_E6a	NovelJunction	0	0.00	2.42	4.15	10.54	1.91	8.74	4.54
24	ER5a	ExonRegion	0	85.83	85.57	212.60	140.75	172.71	157.34	229.26
25	E5a_E6a	KnownJunction	0	101.94	90.40	221.03	166.83	148.55	149.68	242.07
26	ER6a	ExonRegion	0	75.18	85.22	136.62	117.91	123.67	126.44	146.28
27	E6_Da	KnownBoundary	0	6.24	8.25	7.73	10.78	10.81	11.90	24.02
28	E6a_E6b	KnownJunction	0	83.92	95.52	170.62	88.51	116.46	107.28	139.75
29	ER6b	ExonRegion	1	5.42	11.54	6.78	9.75	15.47	17.09	27.66
30	E6_Ab	KnownBoundary	0	8.24	17.71	3.51	7.94	14.45	10.48	22.67
31	ER6c	ExonRegion	0	58.32	74.98	133.05	114.51	121.27	158.43	133.62
32	IG19	Intergenic	0	3.01	4.39	9.82	9.93	6.78	13.58	4.26
33	IG19_AR2	ActiveIntergenicRegion	0	3.02	5.50	13.42	15.46	9.16	20.74	4.79
34	IG19_AR1	ActiveIntergenicRegion	0	3.86	5.06	11.23	10.86	7.96	14.62	5.37