Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC009271.7	Gene	0	0.04	0.14	0.06	0.07	7.97	0.00	0.36
2	382897	Transcript	0	0.01	0.02	0.01	0.01	1.62	0.00	0.33
3	IG12_AR13	ActiveIntergenicRegion	0	6.95	4.64	14.57	8.59	4.93	5.12	5.50
4	IG12_SR4	SilentIntergenicRegion	0	15.64	4.65	28.52	8.13	5.64	3.63	2.74
5	IG12_AR11	ActiveIntergenicRegion	0	15.63	3.99	37.28	11.86	8.97	5.89	6.54
6	IG12_AR10	ActiveIntergenicRegion	0	7.69	3.95	21.24	9.18	4.89	6.64	5.80
7	IG12_AR9	ActiveIntergenicRegion	0	3.53	8.03	13.76	12.36	3.73	2.93	4.91
8	IG12_AR8	ActiveIntergenicRegion	0	2.49	4.14	16.38	18.56	1.95	7.50	3.49
9	IG12_AR7	ActiveIntergenicRegion	0	4.99	4.98	16.73	17.96	3.24	8.58	5.60
10	IG12_AR6	ActiveIntergenicRegion	0	5.12	5.51	15.22	16.63	3.24	10.79	6.88
11	IG12_AR5	ActiveIntergenicRegion	0	5.38	4.86	16.85	14.81	3.24	9.50	7.42
12	IG12_AR4	ActiveIntergenicRegion	0	5.04	5.13	17.46	15.93	2.79	8.58	6.75
13	IG12_AR3	ActiveIntergenicRegion	0	5.12	8.67	18.06	15.30	1.67	6.87	7.47
14	IG12_SR3	SilentIntergenicRegion	0	5.96	7.24	17.21	17.62	3.52	4.81	5.57
15	IG12_AR2	ActiveIntergenicRegion	0	5.30	3.50	17.36	14.00	2.71	9.27	4.47
16	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.01
21	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	3.63
23	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.62
24	E5_Aa	NovelBoundary	0	23.40	28.08	17.46	9.45	1.98	7.80	12.45
25	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	3.39	0.00	0.37
26	E5_Da	NovelBoundary	0	20.95	12.58	12.47	15.14	6.57	2.47	3.73
27	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	1.34	0.00	0.68
29	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER7a	ExonRegion	0	0.10	0.32	0.13	0.17	16.82	0.00	0.36
31	E7_Da	NovelBoundary	0	41.14	18.63	43.83	20.64	53.74	25.86	16.52
32	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	I7	Intron	0	0.00	0.00	0.00	0.00	7.88	0.00	0.10
34	I7_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	16.09	0.00	0.20
35	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	24.46	0.00	0.00
36	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	5.18	0.00	0.00
37	E8_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	13.99	0.00	0.00
38	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	I8_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	16.82	0.00	0.15
40	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.85	0.00	0.00