Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CTDP1	Gene	0	49.78	71.87	59.25	52.65	84.37	51.27	55.41
2	397782	Transcript	0	0.00	0.00	0.00	0.00	0.10	0.00	0.00
3	75430	Transcript	0	0	0	0	0	0	0	0
4	299543	Transcript	0	20.41	38.00	34.42	39.94	39.33	32.72	21.01
5	ER1a	ExonRegion	0	2.69	14.28	3.15	10.69	5.86	8.32	5.30
6	E1a_E2a	KnownJunction	0	11.27	46.71	23.65	36.71	42.97	24.31	24.11
7	ER2a	ExonRegion	0	28.88	84.14	44.63	62.48	69.51	61.17	66.74
8	E2a_E3a	KnownJunction	0	36.07	86.77	55.77	85.63	55.72	75.55	84.54
9	ER3a	ExonRegion	1	28.31	98.58	47.34	73.98	73.12	62.11	77.08
10	E3a_E4a	KnownJunction	1	24.25	97.57	60.04	77.72	142.40	66.68	87.15
11	ER4a	ExonRegion	0	53.53	121.17	77.10	92.38	146.00	86.17	114.80
12	E4a_E5a	KnownJunction	0	66.43	109.11	70.29	65.37	114.55	66.92	100.52
13	ER5a	ExonRegion	0	77.12	119.64	103.46	76.93	159.20	74.88	118.00
14	E5a_E6a	KnownJunction	0	119.53	103.48	143.33	56.13	151.18	84.55	115.04
15	I5	Intron	0	15.46	6.78	12.08	3.28	2.18	3.48	4.52
16	I5_AR1	ActiveIntronRegion	0	14.46	12.51	14.21	5.07	1.79	8.17	4.92
17	I5_SR2	SilentIntronRegion	0	25.04	7.10	16.60	4.39	3.33	4.92	5.96
18	E6_Aa	NovelBoundary	1	32.83	1.13	18.34	0.00	2.12	1.02	5.59
19	ER6a	ExonRegion	0	114.98	111.30	154.94	53.72	139.42	81.37	100.75
20	E6a_E7a	KnownJunction	0	107.15	94.81	165.42	41.29	122.85	66.41	85.29
21	E7_Aa	NovelBoundary	1	21.38	1.26	9.99	1.68	1.18	3.19	4.70
22	ER7a	ExonRegion	0	103.11	96.60	152.85	59.23	116.61	73.28	97.29
23	E7a_E8a	KnownJunction	0	62.32	76.13	92.14	54.07	73.15	64.43	61.50
24	ER8a	ExonRegion	0	29.48	68.44	42.86	42.82	65.38	35.30	53.12
25	E8a_E9a	KnownJunction	0	35.20	69.62	38.97	41.50	63.63	36.64	62.16
26	E8a_E10a	NovelJunction	0	2.22	4.15	6.22	14.01	0.00	5.82	5.65
27	ER9a	ExonRegion	0	31.53	76.82	42.76	41.59	70.03	37.39	58.74
28	E9a_E10a	KnownJunction	0	41.01	76.87	56.55	45.76	73.91	37.12	60.29
29	ER10a	ExonRegion	0	34.12	64.56	41.84	46.78	55.18	39.55	40.58
30	E10a_E11a	KnownJunction	0	19.14	43.27	37.71	38.12	44.17	33.45	22.93
31	E10a_E12a	KnownJunction	0	12.78	18.21	12.24	12.71	23.84	22.48	18.96
32	ER11a	ExonRegion	0	19.23	41.92	32.67	38.16	38.60	32.14	20.17
33	E11a_E12a	KnownJunction	0	22.87	28.82	32.86	43.54	35.22	32.56	19.94
34	E11a_E14a	NovelJunction	0	0.67	1.23	2.89	11.51	8.14	4.02	4.59
35	ER12a	ExonRegion	0	23.49	44.30	33.80	39.60	45.08	37.10	26.73
36	E12a_E14a	KnownJunction	0	23.75	42.32	31.27	27.93	45.46	42.08	32.02
37	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.10	0.00	0.00
38	ER14a	ExonRegion	0	100.19	91.48	91.30	81.79	145.23	87.23	65.13