Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NPLOC4	Gene	0	156.95	223.18	203.10	160.51	139.47	138.25	198.50
2	374747	Transcript	1	36.58	34.84	26.71	9.83	26.76	9.80	24.99
3	331134	Transcript	0	156.56	261.65	241.47	223.87	206.24	176.48	272.93
4	ER1a	ExonRegion	0	0.32	0.00	0.06	0.00	0.13	0.00	0.06
5	ER2a	ExonRegion	0	52.78	167.73	123.28	87.90	52.93	104.27	87.49
6	E2a_E3a	KnownJunction	0	122.20	299.00	263.29	164.74	91.96	179.59	185.55
7	ER3a	ExonRegion	0	164.76	405.54	280.77	247.94	93.15	260.04	226.01
8	E3a_E4a	KnownJunction	0	244.26	492.22	407.60	318.65	113.70	344.38	305.55
9	ER4a	ExonRegion	0	247.98	475.96	414.33	309.03	175.15	296.27	338.85
10	E4a_E5a	KnownJunction	0	226.27	364.73	335.83	216.19	196.78	165.84	297.88
11	E4a_E6a	NovelJunction	0	8.58	21.41	20.69	30.45	5.60	16.13	9.07
12	E4a_E7a	NovelJunction	1	4.02	21.73	8.41	13.76	1.15	34.06	0.87
13	ER5a	ExonRegion	0	235.91	427.11	337.53	252.09	238.87	228.26	393.00
14	E5a_E6a	KnownJunction	0	226.07	393.31	330.40	265.38	267.80	242.00	395.85
15	E5a_E7a	NovelJunction	0	1.80	12.19	5.29	2.93	0.00	6.54	0.00
16	ER6a	ExonRegion	0	281.06	444.75	376.14	317.19	263.74	262.87	427.75
17	E6a_E7a	KnownJunction	0	282.94	425.15	381.63	349.77	272.81	276.33	409.41
18	ER7a	ExonRegion	0	309.13	501.81	415.39	354.52	295.13	290.16	471.22
19	E7a_E8a	KnownJunction	0	337.29	563.97	481.31	385.97	347.89	310.29	505.90
20	E8_Aa	NovelBoundary	1	145.10	2.44	192.40	3.12	4.93	0.00	5.98
21	ER8a	ExonRegion	0	422.00	622.23	571.32	442.27	364.87	315.78	495.67
22	E8a_E9a	KnownJunction	0	321.36	600.75	566.84	462.96	318.75	307.45	472.78
23	ER9a	ExonRegion	0	520.32	609.09	689.54	421.06	360.95	329.64	477.95
24	E9a_E10a	KnownJunction	0	591.52	588.61	728.56	438.52	385.86	257.65	479.11
25	ER10a	ExonRegion	0	466.70	625.53	702.70	447.47	392.60	305.36	549.68
26	E10a_E11a	KnownJunction	0	473.11	666.90	751.60	437.28	477.52	355.26	594.57
27	ER11a	ExonRegion	0	438.61	647.65	679.19	440.80	397.43	350.84	593.19
28	E11a_E12a	KnownJunction	0	269.01	546.24	489.73	349.07	276.56	249.69	452.44
29	E11a_E13a	NovelJunction	0	3.12	8.56	4.96	3.20	0.00	8.04	3.17
30	ER12a	ExonRegion	0	397.94	556.91	604.44	362.61	344.83	271.56	576.78
31	E12a_E13a	KnownJunction	0	463.01	423.68	576.48	309.35	464.26	213.25	485.09
32	ER13a	ExonRegion	0	481.20	431.83	661.80	314.77	417.65	245.80	581.74
33	E13a_E14a	KnownJunction	0	448.66	396.17	686.99	305.18	393.63	252.11	534.53
34	ER14a	ExonRegion	0	524.82	449.93	738.40	333.07	395.91	290.19	529.29
35	E14a_E15a	KnownJunction	0	581.71	460.09	727.83	344.79	411.35	321.78	592.00
36	ER15a	ExonRegion	0	435.93	460.75	598.71	375.96	333.81	302.14	547.21
37	E15a_E16a	KnownJunction	0	331.09	387.37	485.66	304.37	294.29	215.36	444.63
38	ER16a	ExonRegion	0	276.35	321.25	365.53	266.38	243.43	219.31	414.07
39	E16_Da	KnownBoundary	0	67.61	49.34	44.03	29.53	22.50	39.02	59.10
40	E16a_E17a	KnownJunction	0	106.00	197.14	219.45	183.22	206.16	117.14	257.38
41	ER16b	ExonRegion	0	36.58	34.84	26.71	9.83	26.76	9.80	24.99
42	ER17a	ExonRegion	0	207.13	326.15	263.50	264.53	206.33	235.82	288.49
43	IG29_AR2	ActiveIntergenicRegion	0	3.19	1.16	6.03	0.36	20.01	2.06	2.52