Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC073624.28	Gene	0	35.14	23.85	21.15	52.19	24.35	11.51	12.04
2	311595	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	300682	Transcript	0	57.89	28.97	29.39	64.66	29.30	11.41	15.75
4	ER1a	ExonRegion	0	0.15	3.08	0.90	13.83	1.48	4.85	1.23
5	E1a_E2a	KnownJunction	1	2.04	4.94	4.81	27.77	2.07	9.62	2.05
6	ER2a	ExonRegion	0	25.47	21.46	17.72	49.05	6.61	13.25	7.53
7	E2a_E3a	KnownJunction	1	52.09	30.58	30.85	65.05	9.01	21.04	7.25
8	E3_Aa	NovelBoundary	1	14.55	0.00	8.05	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	1	28.41	30.00	29.98	61.98	14.32	16.52	7.76
10	E3a_E4a	KnownJunction	1	32.41	27.72	32.00	55.65	17.24	21.20	8.53
11	E3a_E5a	NovelJunction	0	5.77	3.26	5.52	14.44	0.97	1.42	1.48
12	ER4a	ExonRegion	0	27.69	21.08	33.19	53.13	18.35	15.09	10.44
13	E4a_E5a	KnownJunction	0	24.10	19.68	19.99	53.07	14.52	19.67	11.25
14	ER5a	ExonRegion	0	27.68	19.08	22.78	72.02	20.76	16.07	10.68
15	E5a_E6a	KnownJunction	0	29.17	20.26	23.81	64.04	24.74	14.18	18.43
16	ER6a	ExonRegion	0	32.58	23.13	26.76	72.36	26.34	15.83	13.06
17	E6a_E7a	KnownJunction	0	42.71	23.04	37.78	53.86	39.70	16.75	12.20
18	ER7a	ExonRegion	0	37.90	26.53	31.41	66.15	34.47	14.03	9.77
19	E7_Da	NovelBoundary	0	23.92	13.82	8.23	19.80	7.95	3.70	4.08
20	E7a_E8a	KnownJunction	0	34.60	21.94	23.12	44.21	33.43	6.24	8.63
21	I7	Intron	0	27.64	9.83	7.39	14.13	6.28	4.95	4.76
22	I7_AR1	ActiveIntronRegion	0	30.03	10.29	8.17	15.66	6.81	5.65	5.10
23	I7_AR2	ActiveIntronRegion	1	12.40	6.93	2.32	4.29	2.90	0.47	2.58
24	E8_Aa	NovelBoundary	1	7.74	9.43	5.88	11.46	1.06	0.00	3.80
25	ER8a	ExonRegion	0	49.50	32.21	30.32	60.96	28.42	12.45	12.58
26	E8_Da	KnownBoundary	0	86.90	38.01	39.56	71.06	29.00	18.28	16.51
27	E8a_E14b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER8b	ExonRegion	0	90.65	48.05	46.17	83.03	48.56	16.88	19.95
29	E8b_E9a	KnownJunction	0	102.26	46.79	50.02	87.42	59.38	16.00	21.44
30	E8b_E10a	NovelJunction	0	5.57	6.94	3.35	10.59	0.00	4.66	2.67
31	ER9a	ExonRegion	0	74.04	37.16	37.64	76.95	46.50	9.43	21.79
32	E9a_E10a	KnownJunction	1	59.90	28.37	33.87	71.52	26.86	3.38	17.15
33	ER10a	ExonRegion	0	63.00	27.92	23.18	59.11	31.59	7.84	17.71
34	E10a_E11a	KnownJunction	0	73.00	20.20	36.89	58.11	16.02	8.82	15.08
35	I10_AR1	ActiveIntronRegion	0	5.92	4.31	2.77	6.67	8.85	1.95	2.10
36	E11_Aa	NovelBoundary	1	18.08	2.02	7.49	7.26	10.21	0.00	1.33
37	ER11a	ExonRegion	0	50.12	32.88	20.94	62.93	26.44	10.38	14.59
38	E11a_E12a	KnownJunction	0	86.04	29.16	33.22	76.61	31.54	20.98	19.05
39	ER12a	ExonRegion	0	51.66	25.24	22.06	64.93	23.72	11.64	10.29
40	E12a_E13a	KnownJunction	0	39.04	23.51	29.01	50.23	19.41	13.37	18.04
41	ER13a	ExonRegion	0	31.73	23.16	22.42	57.31	20.46	8.13	13.97
42	E13a_E14a	KnownJunction	0	21.65	16.89	18.09	61.63	10.14	10.56	6.78
43	ER14a	ExonRegion	0	40.88	24.23	21.49	53.42	25.56	12.00	13.57
44	E14_Ab	KnownBoundary	0	52.14	20.10	21.94	65.64	20.19	11.36	16.62
45	ER14b	ExonRegion	0	48.76	29.21	19.32	68.32	36.50	13.22	22.10
46	E14_Da	KnownBoundary	0	36.25	29.66	16.57	52.45	44.05	10.99	18.00
47	ER14c	ExonRegion	0	26.49	21.96	16.45	42.06	23.98	10.33	11.09