Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CUEDC1	Gene	0	25.09	45.76	9.07	17.90	10.72	32.93	24.96
2	407144	Transcript	0	1.75	1.54	0.42	3.92	0.62	2.28	2.06
3	360238	Transcript	0	0.77	0.80	0.00	1.29	0.05	0.35	0.57
4	ER1a	ExonRegion	0	0.23	1.45	0.02	1.54	0.36	0.22	0.74
5	E1a_E3a	KnownJunction	0	3.27	1.63	0.82	6.31	0.88	4.34	3.37
6	I1_AR2	ActiveIntronRegion	0	10.25	4.01	2.15	1.92	1.25	5.99	2.56
7	ER2a	ExonRegion	0	1.54	1.61	0.00	2.58	0.10	0.69	1.14
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	I2_AR2	ActiveIntronRegion	0	10.19	1.77	1.53	1.21	0.00	1.90	3.55
10	ER3a	ExonRegion	0	14.80	42.40	4.96	14.61	4.73	30.77	14.58
11	E3a_E4a	KnownJunction	0	33.08	72.22	13.28	25.76	9.45	62.34	38.12
12	ER4a	ExonRegion	0	32.08	75.47	10.75	25.51	10.76	47.31	36.57
13	E4a_E5a	KnownJunction	0	31.33	64.18	5.78	17.31	6.92	31.68	25.94
14	ER5a	ExonRegion	0	35.73	67.59	9.42	21.89	15.14	38.01	33.71
15	E5a_E6a	KnownJunction	0	32.80	59.24	11.19	30.26	11.80	32.83	35.66
16	ER6a	ExonRegion	0	52.38	73.30	18.78	28.63	20.77	54.69	41.61
17	E6a_E7a	KnownJunction	0	51.42	90.58	27.72	31.99	18.05	55.53	43.50
18	E6a_E8a	NovelJunction	0	2.84	8.88	0.00	4.17	0.00	6.54	0.89
19	E6a_E11a	NovelJunction	0	0.00	1.21	0.00	1.35	0.00	9.59	0.00
20	ER7a	ExonRegion	0	56.32	70.69	24.59	26.68	25.44	50.98	50.47
21	E7a_E8a	KnownJunction	0	52.81	67.52	12.95	27.12	31.14	45.37	64.88
22	E8_Aa	NovelBoundary	1	19.09	2.52	4.02	1.41	0.00	0.00	1.33
23	ER8a	ExonRegion	0	57.23	81.51	19.28	28.84	28.48	49.94	58.36
24	E8a_E9a	KnownJunction	0	58.41	87.43	24.66	31.75	31.65	58.48	37.52
25	ER9a	ExonRegion	0	52.71	74.62	22.89	26.36	21.88	55.18	44.99
26	E9_Da	NovelBoundary	0	15.87	23.78	3.29	12.65	2.35	21.71	10.22
27	E9a_E10a	KnownJunction	1	22.90	49.10	5.53	22.49	18.42	33.37	46.69
28	I9	Intron	0	13.02	12.45	3.03	4.57	2.22	6.92	4.72
29	I9_SR1	SilentIntronRegion	0	14.22	13.53	3.48	4.71	2.57	8.50	4.75
30	I9_AR1	ActiveIntronRegion	0	10.34	10.04	2.01	4.32	1.40	3.25	4.71
31	E10_Aa	NovelBoundary	1	12.20	4.94	1.42	1.54	2.24	4.23	9.79
32	ER10a	ExonRegion	0	26.67	50.32	9.00	24.39	21.78	29.51	47.58
33	E10_Da	NovelBoundary	1	15.17	25.22	2.85	6.07	5.28	4.66	12.05
34	E10a_E11a	KnownJunction	0	28.47	40.59	12.89	17.45	16.62	24.20	41.29
35	I10	Intron	0	12.40	15.83	3.04	6.33	1.96	9.48	5.87
36	I10_AR1	ActiveIntronRegion	0	12.44	15.87	3.05	6.35	1.97	9.51	5.88
37	E11_Aa	NovelBoundary	1	19.49	17.29	4.40	4.50	0.00	17.98	2.34
38	ER11a	ExonRegion	0	34.48	57.99	15.06	29.24	16.84	46.19	40.31
39	E11a_E12a	KnownJunction	0	35.83	70.99	12.67	31.99	20.24	61.61	40.83
40	ER12a	ExonRegion	0	34.36	58.67	13.39	27.22	17.35	50.38	38.24
41	IG34_AR3	ActiveIntergenicRegion	0	14.97	27.33	5.06	10.34	6.13	19.08	12.46