Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CRLF3	Gene	0	61.77	56.86	83.10	56.79	126.60	38.78	82.66
2	324238	Transcript	0	44.01	70.18	69.24	64.98	118.11	36.53	90.37
3	ER1a	ExonRegion	0	4.11	13.56	6.28	16.40	20.05	7.38	13.40
4	E1a_E2a	KnownJunction	1	8.48	43.66	14.50	36.79	20.26	12.94	30.30
5	ER2a	ExonRegion	0	31.16	70.71	71.88	68.32	101.02	51.46	85.03
6	E2_Da	NovelBoundary	1	4.92	2.84	9.69	18.48	1.18	16.83	3.91
7	E2a_E3a	KnownJunction	0	45.58	72.67	103.42	58.52	98.44	59.47	116.89
8	I2_AR1	ActiveIntronRegion	0	6.63	5.50	7.35	6.84	2.78	14.86	3.54
9	ER3a	ExonRegion	0	45.75	90.27	97.27	88.61	143.93	45.21	126.73
10	E3a_E4a	KnownJunction	1	47.93	92.50	71.18	76.67	157.40	24.04	115.97
11	ER4a	ExonRegion	0	58.05	95.44	99.03	93.47	170.81	53.02	140.27
12	E4a_E5a	KnownJunction	0	48.63	83.15	68.59	74.23	169.78	37.47	107.21
13	I4_AR1	ActiveIntronRegion	0	13.60	6.47	16.94	14.88	17.50	10.89	9.87
14	E5_Aa	NovelBoundary	1	14.20	9.46	9.17	24.30	19.66	15.28	9.72
15	ER5a	ExonRegion	0	60.03	82.14	81.47	81.19	158.63	53.52	113.01
16	E5_Da	NovelBoundary	1	7.89	2.68	11.32	12.79	34.97	27.44	12.05
17	E5a_E6a	KnownJunction	0	42.23	71.43	53.01	64.26	98.71	28.09	80.44
18	I5	Intron	0	11.00	5.74	11.99	8.40	24.34	10.29	7.57
19	I5_AR2	ActiveIntronRegion	0	18.26	7.82	18.76	10.21	30.10	14.64	10.46
20	E6_Aa	NovelBoundary	1	17.16	12.66	14.15	28.39	27.87	36.39	13.86
21	ER6a	ExonRegion	0	61.11	85.71	76.89	82.84	149.46	48.04	90.07
22	E6_Da	NovelBoundary	1	36.30	18.86	24.33	41.53	60.77	23.05	15.22
23	E6a_E7a	KnownJunction	0	41.67	72.56	48.36	60.06	118.75	29.13	78.24
24	I6_AR2	ActiveIntronRegion	0	10.37	7.16	9.41	3.01	23.78	7.85	11.35
25	I6_AR4	ActiveIntronRegion	0	13.09	5.64	13.37	6.94	29.86	9.78	7.41
26	I6_SR4	SilentIntronRegion	0	10.26	5.05	10.06	7.21	21.49	12.05	6.63
27	I6_AR6	ActiveIntronRegion	0	13.06	3.64	11.89	3.74	27.53	9.67	4.20
28	I6_AR7	ActiveIntronRegion	1	16.67	4.17	12.55	8.08	21.58	13.75	4.43
29	I6_AR8	ActiveIntronRegion	0	19.74	3.64	10.25	11.30	25.61	12.72	3.54
30	I6_SR6	SilentIntronRegion	1	17.16	3.64	6.89	10.60	36.31	9.81	2.70
31	I6_AR9	ActiveIntronRegion	0	14.05	2.89	4.30	9.12	31.20	8.35	2.53
32	ER7a	ExonRegion	0	41.90	71.41	73.85	62.27	118.27	30.62	95.74
33	E7a_E8a	KnownJunction	0	47.35	58.38	78.95	60.95	112.66	29.83	83.92
34	ER8a	ExonRegion	0	76.11	49.09	93.92	50.08	133.54	37.71	78.41
35	IG27_AR11	ActiveIntergenicRegion	0	2.55	3.04	2.91	3.07	17.31	2.42	5.06
36	IG27_AR9	ActiveIntergenicRegion	0	3.77	2.57	7.15	2.21	15.26	2.19	4.89
37	IG27_AR7	ActiveIntergenicRegion	0	2.08	2.98	1.94	3.03	8.76	5.00	1.20
38	IG27_AR4	ActiveIntergenicRegion	0	2.47	0.00	1.08	0.00	34.37	0.00	0.00
39	IG27_AR1	ActiveIntergenicRegion	0	3.07	1.21	1.35	0.00	11.42	0.00	0.67