Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ARHGAP23	Gene	0	11.43	113.84	87.97	447.97	95.92	229.27	138.88
2	300901	Transcript	0	12.51	109.16	94.98	437.28	109.01	218.40	144.79
3	IG30_AR1	ActiveIntergenicRegion	0	47.31	33.78	40.62	50.01	85.56	21.22	58.48
4	IG30_AR2	ActiveIntergenicRegion	0	0.00	0.00	1.46	1.25	16.46	0.00	0.00
5	IG30_AR5	ActiveIntergenicRegion	0	0.18	0.00	1.05	0.00	9.94	0.56	0.16
6	IG30_AR6	ActiveIntergenicRegion	0	0.40	0.00	0.17	1.48	31.07	1.15	0.06
7	IG30_AR7	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.66	16.76	0.73	0.80
8	IG30_SR8	SilentIntergenicRegion	0	0.21	0.10	0.85	0.49	8.67	0.07	0.66
9	IG30_AR10	ActiveIntergenicRegion	0	0.60	15.34	4.45	27.31	30.57	10.91	16.66
10	IG30_AR13	ActiveIntergenicRegion	0	3.26	13.26	8.71	24.03	50.02	11.98	18.66
11	IG30_AR14	ActiveIntergenicRegion	0	2.47	16.07	8.60	22.92	45.52	5.59	18.84
12	IG30_AR15	ActiveIntergenicRegion	0	1.39	1.89	2.69	2.49	32.84	1.20	1.17
13	IG30_AR16	ActiveIntergenicRegion	0	4.24	88.35	35.99	295.75	42.79	178.42	64.73
14	ER1a	ExonRegion	0	9.05	123.27	75.85	455.57	68.78	276.57	122.81
15	E1a_E2a	KnownJunction	0	10.25	166.88	85.03	674.03	112.82	317.52	162.68
16	E1a_E5a	NovelJunction	1	0.00	0.00	2.40	25.66	0.00	38.73	0.00
17	ER2a	ExonRegion	0	15.88	188.73	102.54	728.92	121.82	351.46	197.62
18	E2a_E3a	KnownJunction	0	17.12	131.96	82.05	571.89	81.81	244.41	143.30
19	ER3a	ExonRegion	0	9.47	111.76	65.97	458.47	77.89	201.91	120.65
20	E3a_E4a	KnownJunction	0	6.03	94.26	70.87	373.15	65.06	175.27	113.56
21	ER4a	ExonRegion	0	10.39	102.11	64.82	399.72	72.36	159.95	102.12
22	E4a_E5a	KnownJunction	0	13.45	112.86	70.50	444.97	62.31	161.31	119.34
23	ER5a	ExonRegion	0	9.07	110.53	72.16	464.42	65.02	215.84	116.33
24	E5a_E6a	KnownJunction	0	2.14	87.33	26.61	357.25	36.79	133.89	67.43
25	ER6a	ExonRegion	0	1.80	45.43	20.92	183.61	24.51	86.04	47.27
26	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER7a	ExonRegion	0	12.06	50.57	74.00	238.37	42.46	103.16	116.66
28	E7a_E8a	KnownJunction	0	5.91	22.12	55.99	76.48	55.67	44.94	84.83
29	ER8a	ExonRegion	0	14.79	113.02	91.92	429.38	88.97	206.25	128.23
30	E8a_E9a	KnownJunction	0	16.81	109.03	123.04	502.27	154.48	254.14	158.61
31	ER9a	ExonRegion	0	16.64	128.76	116.08	551.89	129.45	274.76	155.04
32	E9a_E10a	KnownJunction	0	16.46	133.46	120.32	605.19	170.73	300.51	186.28
33	E10_Aa	NovelBoundary	1	4.27	0.00	27.61	4.04	0.00	0.00	0.00
34	ER10a	ExonRegion	0	17.58	142.09	128.18	585.95	165.75	287.69	197.89
35	E10a_E11a	KnownJunction	0	28.21	151.95	189.53	677.30	170.78	355.26	257.46
36	E10a_E12a	NovelJunction	1	0.00	4.54	2.79	80.60	0.00	33.15	2.39
37	ER11a	ExonRegion	0	24.41	158.53	186.96	714.79	183.16	331.87	290.02
38	E11a_E12a	KnownJunction	0	19.69	164.04	165.95	645.39	231.84	338.24	278.17
39	ER12a	ExonRegion	0	16.83	144.37	150.89	609.11	194.41	337.66	224.19
40	E12a_E13a	KnownJunction	0	29.11	142.65	167.23	568.80	203.60	327.65	205.66
41	E12a_E14a	NovelJunction	0	0.00	1.34	0.00	10.65	0.00	8.82	0.00
42	ER13a	ExonRegion	0	24.79	167.54	194.21	663.26	239.90	346.83	257.05
43	E13a_E14a	KnownJunction	0	8.73	121.69	119.66	469.65	136.68	285.66	170.14
44	ER14a	ExonRegion	0	12.92	133.09	125.17	513.58	115.67	278.07	186.47
45	E14a_E15a	KnownJunction	0	11.17	106.01	95.19	410.46	103.07	226.48	118.45
46	ER15a	ExonRegion	0	9.24	109.25	91.79	312.22	124.20	174.38	132.93
47	E15a_E16a	KnownJunction	0	5.27	64.21	64.36	166.20	113.05	115.48	100.52
48	ER16a	ExonRegion	0	5.18	55.75	41.56	140.74	75.14	75.70	71.62
49	I16_AR4	ActiveIntronRegion	0	2.02	30.28	9.50	157.08	12.40	78.80	22.62
50	I16_AR5	ActiveIntronRegion	1	1.84	47.82	16.09	196.92	22.52	117.07	37.17
51	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	IG31	Intergenic	0	5.48	36.46	38.98	174.03	32.87	138.01	53.16
53	IG31_AR1	ActiveIntergenicRegion	0	17.77	125.90	134.78	600.90	113.18	478.60	184.72