Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC005726.8	Gene	0	2.48	3.41	1.27	2.15	36.97	4.70	3.40
2	301039	Transcript	0	1.95	2.48	1.35	1.78	35.26	4.61	3.63
3	378934	Transcript	0	0.51	1.15	0.74	2.45	20.61	4.65	2.53
4	IG39_AR2	ActiveIntergenicRegion	0	0.96	2.61	5.00	5.00	0.29	10.19	0.91
5	ER1a	ExonRegion	0	0.62	0.65	0.36	2.30	5.57	3.07	0.01
6	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	10.35	3.16	0.00
7	ER2a	ExonRegion	0	0.27	0.00	0.24	0.44	18.41	0.87	1.30
8	E2_Da	NovelBoundary	0	2.05	1.42	0.63	0.00	30.84	3.00	0.00
9	I2	Intron	0	3.57	2.91	1.43	2.87	32.20	3.64	2.06
10	I2_SR1	SilentIntronRegion	0	1.28	1.35	0.82	2.13	17.53	2.22	1.22
11	I2_AR1	ActiveIntronRegion	0	6.02	4.62	2.12	3.77	48.52	5.26	3.02
12	E3a_E4a	KnownJunction	0	0.00	1.31	0.00	1.35	10.83	2.52	3.80
13	E4_Aa	NovelBoundary	0	1.47	3.55	0.00	1.41	29.92	5.17	3.84
14	ER3a	ExonRegion	0	0.00	0.00	0.00	1.25	8.14	3.94	0.67
15	ER4a	ExonRegion	0	0.00	0.00	0.00	1.09	25.52	4.57	1.39
16	E4_Da	NovelBoundary	0	1.47	2.63	1.57	4.33	24.71	1.02	3.24
17	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	24.85	3.32	1.49
18	I4	Intron	0	3.11	6.18	2.00	4.46	12.34	6.60	3.35
19	I4_AR1	ActiveIntronRegion	0	3.12	6.19	2.00	4.46	12.36	6.60	3.36
20	E5_Aa	NovelBoundary	0	6.88	4.60	1.58	4.14	9.98	8.87	1.52
21	ER5a	ExonRegion	0	1.56	2.65	1.58	3.33	40.20	4.31	5.13
22	E5_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	15.56	1.18	0.00
23	E5a_E5b	KnownJunction	0	2.77	5.60	4.22	10.59	35.92	12.68	6.51
24	E5_Ab	KnownBoundary	0	0.73	4.49	0.83	3.25	25.38	1.58	0.82
25	ER5b	ExonRegion	0	3.59	4.05	2.94	4.16	49.40	6.13	8.99
26	ER5c	ExonRegion	0	6.72	6.76	5.00	7.13	60.99	9.16	11.89
27	E5_Db	KnownBoundary	0	7.04	5.39	5.09	5.69	50.55	9.19	12.74
28	ER5d	ExonRegion	0	5.40	4.86	3.80	4.64	55.53	5.41	6.97
29	E5_Dc	NovelBoundary	0	5.86	8.43	2.36	4.74	7.08	10.10	4.70
30	E5c_E6a	KnownJunction	0	0.72	0.00	0.75	0.00	39.84	1.29	1.72
31	I5	Intron	0	1.99	3.38	0.95	4.83	16.00	5.79	1.70
32	I5_AR1	ActiveIntronRegion	0	2.00	3.40	0.95	4.86	16.12	5.83	1.71
33	E6_Aa	NovelBoundary	0	2.67	7.57	0.76	3.14	19.53	1.53	0.00
34	ER6a	ExonRegion	0	1.29	4.87	1.29	0.73	45.21	6.09	5.02
35	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	23.49	5.68	1.78
36	ER7a	ExonRegion	0	3.99	5.44	1.67	2.45	52.66	6.05	4.55
37	IG38_AR2	ActiveIntergenicRegion	0	3.12	4.28	2.51	3.65	29.06	6.00	4.94
38	IG38_AR1	ActiveIntergenicRegion	0	2.03	7.99	3.48	11.10	3.77	10.11	3.77