Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MAP2K3	Gene	0	425.55	1713.02	335.45	671.98	59.13	558.45	176.99
2	342679	Transcript	0	0.00	0.87	0.35	0.32	0.00	0.50	0.01
3	361818	Transcript	0	0	0	0	0	0	0	0
4	395491	Transcript	0	9.76	95.52	11.07	54.62	1.98	72.20	7.52
5	395492	Transcript	0	6.99	16.42	5.34	2.24	0.00	1.56	1.06
6	316920	Transcript	0	19.36	38.93	15.06	10.92	0.58	11.60	2.95
7	ER1a	ExonRegion	0	0.00	0.87	0.35	0.32	0.00	0.50	0.01
8	E1_Ab	KnownBoundary	0	0.00	0.97	0.89	0.00	0.00	0.00	0.72
9	E1_Ac	KnownBoundary	0	1.54	88.27	5.03	30.83	1.87	33.02	3.20
10	ER1b	ExonRegion	0	0.96	48.37	1.99	22.45	1.21	23.14	2.40
11	ER1c	ExonRegion	0	63.29	629.58	46.76	201.84	6.56	207.57	31.65
12	E1a_E4a	KnownJunction	0	9.76	95.52	11.07	54.62	1.98	72.20	7.52
13	E1a_E6b	KnownJunction	0	256.04	1609.60	197.58	533.29	38.13	438.42	116.17
14	E1a_E7a	NovelJunction	1	0.00	6.20	0.00	10.51	0.00	30.18	0.00
15	ER2a	ExonRegion	0	10.45	8.81	9.16	3.38	0.00	0.00	1.27
16	E2a_E3a	KnownJunction	0	0.00	5.28	0.62	1.19	0.00	0.00	0.00
17	ER3a	ExonRegion	0	9.34	29.05	5.68	2.73	0.00	3.92	0.60
18	E3a_E4a	KnownJunction	0	8.18	22.54	5.91	1.68	0.00	2.33	2.38
19	ER4a	ExonRegion	0	53.51	195.95	30.77	80.29	2.47	101.54	12.25
20	E4a_E6b	KnownJunction	0	29.09	184.24	17.27	77.86	2.26	111.62	24.25
21	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E5a_E6a	KnownJunction	0	20.26	24.17	14.01	2.93	0.00	4.58	0.79
23	ER6a	ExonRegion	0	37.81	92.62	31.18	29.84	1.73	30.23	8.07
24	ER6b	ExonRegion	0	450.96	2488.63	287.61	888.54	56.81	825.28	161.79
25	E6a_E7a	KnownJunction	0	382.37	1913.72	231.35	728.97	37.78	664.04	119.45
26	ER7a	ExonRegion	0	380.44	1975.78	259.33	744.89	44.46	616.20	144.32
27	E7a_E8a	KnownJunction	0	335.08	1880.54	281.44	703.75	70.50	558.00	157.43
28	E7a_E9a	NovelJunction	1	1.67	4.89	2.95	8.72	0.00	48.29	1.78
29	ER8a	ExonRegion	0	502.62	2282.42	369.08	816.52	80.50	675.21	210.17
30	E8a_E9a	KnownJunction	0	612.79	2493.84	467.42	859.19	112.41	738.60	250.43
31	ER9a	ExonRegion	0	555.50	2940.19	476.77	1066.51	99.66	874.61	295.37
32	E9a_E10a	KnownJunction	0	651.63	3191.51	555.08	1240.23	126.05	941.85	373.36
33	ER10a	ExonRegion	0	789.57	3573.24	685.55	1366.29	157.76	1096.68	419.30
34	E10a_E11a	KnownJunction	0	618.95	3266.85	554.92	1186.51	160.36	934.53	380.18
35	E10a_E12a	NovelJunction	1	89.57	3.81	54.23	1.68	0.00	1.07	2.32
36	E10a_E14a	NovelJunction	1	7.49	5.39	13.49	18.26	0.00	79.68	0.75
37	E10a_E15a	NovelJunction	1	1.72	0.00	5.65	4.50	0.00	23.48	0.00
38	ER11a	ExonRegion	0	611.34	3513.74	590.78	1342.28	144.85	945.41	411.62
39	E11a_E12a	KnownJunction	0	517.55	3152.55	535.22	1274.20	131.17	832.56	368.56
40	ER12a	ExonRegion	0	612.20	3527.02	612.91	1328.40	125.96	941.71	411.40
41	E12a_E13a	KnownJunction	0	596.23	3115.79	595.52	1176.08	97.74	801.47	348.81
42	ER13a	ExonRegion	0	626.11	3300.88	614.27	1170.00	128.14	836.22	329.94
43	E13a_E14a	KnownJunction	0	628.61	3087.42	566.28	1151.32	122.80	804.53	293.99
44	E13a_E15a	NovelJunction	0	20.19	42.43	29.09	74.45	4.45	39.96	16.08
45	I13	Intron	1	138.88	84.10	69.26	16.57	1.22	18.92	7.87
46	I13_SR2	SilentIntronRegion	1	113.86	72.86	58.33	14.06	1.15	15.95	6.15
47	I13_AR1	ActiveIntronRegion	1	158.76	74.31	75.39	17.89	0.93	16.96	10.78
48	I13_AR2	ActiveIntronRegion	1	106.13	78.55	70.22	18.55	1.26	21.31	8.55
49	I13_AR3	ActiveIntronRegion	1	151.49	76.88	80.80	32.60	1.62	26.80	10.60
50	I13_AR4	ActiveIntronRegion	1	107.81	48.07	49.59	18.38	0.45	17.25	5.72
51	I13_SR3	SilentIntronRegion	1	181.46	109.13	87.90	19.73	1.48	24.34	9.92
52	ER14a	ExonRegion	0	724.55	2838.78	588.29	1053.67	100.18	818.51	300.59
53	E14a_E15a	KnownJunction	0	682.12	2481.81	650.30	945.18	70.54	782.79	283.91
54	ER15a	ExonRegion	0	698.74	2828.98	643.31	1115.68	83.64	991.35	297.38
55	E15a_E16a	KnownJunction	0	535.91	2474.61	434.11	1020.17	93.53	948.77	226.32
56	ER16a	ExonRegion	0	601.86	2363.84	467.34	932.03	64.63	811.71	228.16
57	E16_Da	KnownBoundary	0	650.99	1933.37	517.50	872.93	75.27	620.98	235.87
58	ER16b	ExonRegion	0	505.09	1480.65	359.33	650.22	53.35	569.99	161.89