Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KATNB1	Gene	0	21.28	28.39	17.90	13.15	57.12	17.14	30.05
2	379661	Transcript	0	20.31	19.22	13.23	7.61	45.25	10.03	17.22
3	394326	Transcript	0	1.64	2.66	1.45	2.58	5.20	2.13	1.40
4	268509	Transcript	0	0	0	0	0	0	0	0
5	ER1a	ExonRegion	0	25.84	22.31	13.31	6.86	43.09	10.10	29.99
6	E1a_E3a	KnownJunction	0	30.99	33.13	23.88	14.71	84.97	19.16	21.21
7	ER2a	ExonRegion	0	0.40	2.08	0.15	1.13	4.47	2.04	0.22
8	E2a_E3a	KnownJunction	0	0.00	1.63	0.76	0.00	20.63	3.70	0.00
9	ER3a	ExonRegion	0	30.47	36.71	25.06	15.93	66.46	22.34	36.48
10	E3_Ab	KnownBoundary	0	23.07	32.34	39.85	15.04	166.60	22.32	35.11
11	ER3b	ExonRegion	0	38.09	44.08	30.01	21.66	125.57	42.89	55.75
12	E3a_E4a	KnownJunction	0	32.24	48.26	20.87	23.05	87.55	55.13	63.06
13	ER4a	ExonRegion	0	24.47	46.23	19.79	18.29	57.74	29.98	40.95
14	E4a_E5a	KnownJunction	0	56.43	53.23	37.38	28.74	74.76	46.77	77.06
15	ER5a	ExonRegion	0	42.15	49.43	33.03	20.96	103.62	39.78	59.14
16	E5_Da	NovelBoundary	0	1.03	7.64	1.39	1.41	1.18	1.66	0.66
17	E5a_E6a	KnownJunction	0	42.58	67.49	41.53	24.17	128.68	39.37	66.50
18	ER6a	ExonRegion	0	42.10	57.93	36.10	25.27	106.06	28.25	51.34
19	E6a_E7a	KnownJunction	1	34.95	57.80	31.59	10.65	91.20	25.06	38.06
20	ER7a	ExonRegion	0	37.87	66.21	33.37	20.60	90.32	42.47	48.12
21	E7a_E8a	KnownJunction	0	30.93	48.81	26.33	20.18	87.65	42.91	42.76
22	ER8a	ExonRegion	0	32.82	59.60	37.43	18.76	99.37	34.90	58.75
23	E8a_E9a	KnownJunction	0	36.87	45.00	52.67	15.25	118.28	27.26	65.71
24	ER9a	ExonRegion	0	37.61	51.58	51.41	27.10	135.92	31.91	61.57
25	E9_Da	KnownBoundary	0	7.49	1.58	3.00	6.85	0.00	4.66	0.59
26	E9a_E9b	KnownJunction	0	33.43	40.25	36.27	19.40	91.80	29.77	47.77
27	ER9b	ExonRegion	0	2.33	4.23	2.75	6.47	2.87	2.54	0.91
28	E9_Ab	KnownBoundary	0	1.00	7.04	3.31	1.38	5.92	0.00	0.66
29	ER9c	ExonRegion	0	38.64	45.36	36.99	17.74	118.61	24.33	62.40
30	E9_Db	KnownBoundary	0	2.55	0.00	0.73	1.49	0.97	1.66	0.89
31	E9b_E9c	KnownJunction	0	41.32	42.09	37.45	13.95	134.86	12.30	64.31
32	ER9d	ExonRegion	0	1.23	2.37	1.75	4.33	2.49	1.04	1.24
33	E9_Ac	KnownBoundary	0	0.78	2.05	0.00	1.57	3.23	1.21	1.46
34	ER9e	ExonRegion	1	30.59	58.75	33.77	22.40	101.38	15.76	55.87
35	E9_Dc	KnownBoundary	0	1.74	1.63	2.23	4.63	5.49	1.21	0.83
36	E9c_E9d	KnownJunction	1	48.28	59.69	44.10	17.77	105.54	7.37	54.04
37	ER9f	ExonRegion	0	1.79	2.99	1.87	1.46	2.90	2.98	0.61
38	E9_Ad	KnownBoundary	0	0.87	1.63	1.21	0.00	0.00	2.73	0.59
39	ER9g	ExonRegion	0	41.08	47.25	30.64	15.83	93.17	22.19	55.33
40	E9d_E10a	KnownJunction	0	51.82	31.50	32.55	17.47	93.80	23.13	56.94
41	ER10a	ExonRegion	0	49.47	38.43	31.41	13.77	104.79	23.06	47.36
42	E10a_E11a	KnownJunction	0	53.36	48.42	58.11	14.09	167.43	26.13	80.34
43	ER11a	ExonRegion	0	49.60	41.45	48.68	18.83	134.42	30.70	85.13
44	E11a_E12a	KnownJunction	0	36.82	38.51	29.90	16.63	77.92	29.48	69.52
45	ER12a	ExonRegion	0	42.93	46.68	33.75	16.82	112.40	33.62	59.19
46	E12a_E13a	KnownJunction	0	52.09	53.80	31.84	16.50	95.90	32.37	51.06
47	ER13a	ExonRegion	0	32.63	51.73	27.51	20.82	135.75	32.59	55.69
48	E13a_E14a	KnownJunction	0	36.82	50.07	30.16	18.88	147.47	41.91	58.50
49	ER14a	ExonRegion	0	35.17	47.01	25.08	17.27	111.94	28.96	50.98
50	E14a_E15a	KnownJunction	0	28.96	36.18	15.69	13.63	81.45	15.73	46.53
51	E15_Aa	NovelBoundary	0	11.75	12.56	5.66	5.39	12.98	14.55	12.11
52	ER15a	ExonRegion	0	35.25	49.94	29.16	25.49	121.79	33.44	66.06
53	E15a_E16a	KnownJunction	0	46.30	61.95	40.55	29.53	188.60	50.76	81.99
54	ER16a	ExonRegion	0	39.25	57.52	35.84	28.45	141.00	40.38	70.94
55	E16_Da	KnownBoundary	0	0.95	1.39	0.57	2.30	1.08	3.19	1.19
56	E16a_E16b	KnownJunction	0	53.01	70.01	34.95	29.01	121.00	44.51	68.48
57	ER16b	ExonRegion	0	4.98	3.33	1.54	2.36	1.68	2.44	4.82
58	E16_Ab	KnownBoundary	0	3.99	3.55	2.16	2.60	0.00	1.15	1.19
59	ER16c	ExonRegion	0	35.57	50.43	31.83	31.85	106.99	40.82	53.64
60	E16_Db	KnownBoundary	0	0.00	0.00	0.88	1.25	0.00	0.00	3.11
61	E16b_E16c	KnownJunction	0	25.07	41.80	32.43	25.06	101.85	37.25	45.03
62	ER16d	ExonRegion	0	0.75	1.99	1.31	2.34	1.38	0.21	2.03
63	E16_Ac	KnownBoundary	0	0.83	1.00	0.00	1.38	0.00	1.53	1.76
64	ER16e	ExonRegion	0	26.42	48.53	23.67	26.82	83.35	33.12	46.66
65	E16_Dc	KnownBoundary	0	28.62	50.89	19.00	26.39	62.36	30.77	43.34
66	ER16f	ExonRegion	0	18.80	27.47	12.77	15.60	37.69	15.10	20.16
67	ER16g	ExonRegion	0	4.10	2.23	2.48	1.25	7.69	0.82	0.45