Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NDE1	Gene	0	16.34	27.08	31.45	48.50	29.54	66.95	73.87
2	396355	Transcript	0	6.85	2.47	7.65	0.90	1.67	2.06	1.81
3	396354	Transcript	0	0.00	0.00	0.27	0.00	1.19	0.00	0.00
4	396358	Transcript	0	0	0	0	0	0	0	0
5	396353	Transcript	0	7.65	11.84	11.29	26.25	24.03	32.76	57.18
6	342673	Transcript	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	1.50	0.70	2.66	2.58	0.81	0.94	0.00
8	E1a_E2a	KnownJunction	0	0.00	1.63	0.00	0.00	0.00	1.45	0.00
9	ER2a	ExonRegion	0	0.59	1.68	0.51	0.03	2.81	0.95	0.70
10	E2_Da	NovelBoundary	1	1785.21	1067.25	1157.40	852.20	619.75	815.33	713.89
11	E2a_E4b	KnownJunction	1	25.32	5.88	27.43	1.00	3.07	4.90	6.55
12	ER3a	ExonRegion	0	0.00	0.00	0.27	0.00	1.19	0.00	0.00
13	ER3b	ExonRegion	0	4.93	6.12	11.71	20.21	22.03	16.31	17.51
14	E3a_E4b	KnownJunction	0	14.32	14.37	30.36	48.36	56.39	38.30	46.26
15	ER4a	ExonRegion	0	1.31	1.82	2.85	4.36	4.86	4.29	4.99
16	ER4b	ExonRegion	0	10.92	34.36	30.65	47.68	22.79	82.27	67.18
17	E4a_E5a	KnownJunction	0	9.95	42.40	38.07	77.78	14.29	100.50	70.45
18	ER5a	ExonRegion	0	25.53	54.85	59.05	100.17	47.69	152.52	136.58
19	E5a_E6a	KnownJunction	0	21.76	64.65	60.18	112.89	42.65	135.37	134.24
20	ER6a	ExonRegion	0	27.74	65.38	68.88	120.25	51.67	167.88	173.13
21	E6a_E7a	KnownJunction	0	24.17	57.80	75.03	143.34	78.49	167.31	164.42
22	E6a_E8a	NovelJunction	1	1.57	3.02	0.68	1.33	0.00	12.97	0.00
23	ER7a	ExonRegion	0	25.63	59.32	64.59	117.64	61.24	178.47	186.96
24	E7a_E8a	KnownJunction	0	32.09	55.59	59.62	123.51	55.63	186.23	184.10
25	ER8a	ExonRegion	0	24.94	39.51	44.04	76.03	47.85	119.94	128.69
26	E8a_E9a	KnownJunction	0	28.67	29.77	33.91	60.74	42.60	103.23	137.85
27	ER9a	ExonRegion	0	22.24	26.20	30.42	49.21	44.89	84.33	106.25
28	E9a_E10a	KnownJunction	0	19.54	25.48	33.31	42.64	42.65	92.11	97.63
29	E9a_E11a	NovelJunction	1	1.03	1.60	4.28	0.00	1.13	15.14	2.51
30	ER10a	ExonRegion	0	20.02	32.75	25.43	50.53	42.05	75.08	89.84
31	E10a_E11a	KnownJunction	1	9.05	15.34	10.86	26.52	19.06	30.87	66.97
32	E10a_E12a	KnownJunction	0	10.82	21.07	22.94	21.70	9.15	41.35	46.76
33	I10_AR2	ActiveIntronRegion	0	1.05	3.42	2.84	12.17	8.71	13.76	1.87
34	E11_Aa	NovelBoundary	0	6.68	8.67	9.64	21.48	3.02	36.29	12.14
35	ER11a	ExonRegion	0	6.26	8.34	11.72	25.99	28.99	34.65	47.39
36	E11_Da	NovelBoundary	1	21.03	20.33	30.75	65.89	50.35	99.59	124.28
37	I11	Intron	0	17.81	11.31	18.04	31.32	25.31	52.04	43.79
38	I11_AR1	ActiveIntronRegion	1	21.02	13.66	30.94	41.55	44.86	62.50	85.38
39	I11_SR1	SilentIntronRegion	0	15.57	7.04	14.67	16.05	18.13	21.09	26.65
40	I11_AR2	ActiveIntronRegion	1	22.91	17.61	22.47	48.63	32.67	84.23	56.98
41	E12_Aa	NovelBoundary	1	1.32	4.86	46.53	150.79	1.15	52.82	0.00
42	ER12a	ExonRegion	0	20.91	31.28	36.78	51.76	24.05	59.90	72.08
43	E12_Da	KnownBoundary	0	14.64	28.98	27.10	29.01	34.95	65.02	54.09
44	ER12b	ExonRegion	0	18.81	28.56	36.31	52.29	39.63	73.41	83.97