Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CRAMP1L	Gene	0	57.76	57.68	78.15	55.69	54.55	57.49	29.11
2	397412	Transcript	0	0.00	0.00	1.12	0.99	0.00	3.09	0.11
3	293925	Transcript	0	0.24	0.00	0.21	0.00	0.49	0.00	0.00
4	359804	Transcript	0	0	0	0	0	0	0	0
5	262317	Transcript	0	35.58	38.22	29.55	30.34	15.15	18.92	17.26
6	ER1a	ExonRegion	0	0.00	0.00	0.43	0.30	0.00	0.53	0.00
7	E1a_E2a	KnownJunction	0	0.00	0.00	1.57	1.41	0.00	2.60	0.00
8	ER2a	ExonRegion	0	0.00	0.00	1.35	1.25	0.00	6.13	0.34
9	ER2b	ExonRegion	0	2.31	7.35	2.52	6.33	0.78	9.79	1.46
10	E2_Ac	KnownBoundary	0	1.74	31.66	13.74	19.32	4.45	14.74	4.56
11	ER2c	ExonRegion	0	6.69	32.93	12.54	18.90	6.35	16.85	4.17
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E4a	KnownJunction	1	17.52	30.19	17.34	24.98	7.08	9.22	3.81
14	I2_AR4	ActiveIntronRegion	1	4.91	1.87	16.26	7.48	2.93	4.90	0.67
15	ER3a	ExonRegion	0	0.73	0.00	0.64	0.00	1.48	0.00	0.00
16	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	24.03	36.39	30.72	41.09	11.31	23.81	6.56
18	E4_Ab	KnownBoundary	0	25.15	46.53	40.21	41.75	11.78	43.66	8.41
19	ER4b	ExonRegion	0	35.09	64.69	66.73	56.83	25.58	49.81	17.61
20	E4a_E5a	KnownJunction	0	52.71	77.16	77.27	93.60	42.88	65.23	26.51
21	ER5a	ExonRegion	0	55.61	97.95	77.93	86.11	38.99	67.24	30.14
22	E5a_E6a	KnownJunction	0	52.42	89.27	97.79	99.48	37.90	63.46	26.97
23	ER6a	ExonRegion	0	56.09	74.84	72.67	74.98	39.26	61.62	33.40
24	E6a_E7a	KnownJunction	0	57.45	55.04	56.62	74.96	42.37	53.30	31.67
25	E6a_E8a	NovelJunction	0	0.58	12.19	0.65	3.36	0.00	7.05	0.00
26	ER7a	ExonRegion	0	58.68	69.45	66.84	75.61	42.58	50.77	35.41
27	E7_Da	NovelBoundary	1	19.49	4.62	7.29	0.00	7.72	1.50	6.65
28	E7a_E8a	KnownJunction	0	49.82	62.32	53.86	51.91	37.02	33.50	26.86
29	I7_AR1	ActiveIntronRegion	0	14.98	5.98	8.82	1.86	4.54	1.87	3.89
30	ER8a	ExonRegion	0	39.05	55.88	61.02	48.28	35.79	38.86	22.56
31	E8a_E9a	KnownJunction	0	26.02	53.46	55.08	38.69	26.05	30.47	20.44
32	ER9a	ExonRegion	0	35.17	56.50	45.08	46.82	23.63	34.76	18.57
33	E9a_E10a	KnownJunction	0	30.49	52.31	46.66	50.39	21.46	36.07	26.34
34	ER10a	ExonRegion	0	30.89	60.71	43.30	48.28	25.71	37.86	17.07
35	E10a_E11a	KnownJunction	0	36.40	72.90	44.09	46.14	18.93	41.11	10.81
36	ER11a	ExonRegion	0	25.32	66.28	35.64	58.26	16.53	45.26	10.06
37	ER11b	ExonRegion	0	33.43	63.58	44.28	72.06	21.26	49.86	21.92
38	ER11c	ExonRegion	0	24.88	53.73	40.13	42.25	14.66	34.32	12.78
39	E11_Ac	KnownBoundary	0	27.44	39.80	55.86	29.42	22.02	45.48	16.28
40	ER11d	ExonRegion	0	22.94	53.22	36.33	41.50	13.20	46.56	13.59
41	E11b_E12a	KnownJunction	0	46.13	73.06	57.12	52.58	36.22	53.44	19.62
42	ER12a	ExonRegion	0	54.01	74.84	82.66	69.91	41.22	74.85	29.42
43	E12a_E13a	KnownJunction	0	58.51	70.62	81.09	68.11	37.05	65.04	28.46
44	ER13a	ExonRegion	0	86.90	80.40	133.99	86.75	59.25	80.35	39.57
45	E13_Da	NovelBoundary	0	9.60	18.92	11.53	7.67	1.08	13.29	1.35
46	E13a_E14a	KnownJunction	0	72.40	85.01	125.87	86.80	55.30	59.63	31.63
47	E14_Aa	NovelBoundary	0	25.42	20.54	17.73	7.80	3.07	8.28	9.13
48	ER14a	ExonRegion	0	77.28	70.15	129.12	79.44	57.21	70.76	31.02
49	E14a_E15a	KnownJunction	0	107.18	70.20	167.18	86.01	87.44	94.17	38.81
50	I14_AR1	ActiveIntronRegion	1	20.02	13.94	11.53	1.99	3.98	2.71	3.83
51	I14_SR1	SilentIntronRegion	0	23.29	10.22	11.51	4.17	3.95	1.86	5.91
52	I14_AR2	ActiveIntronRegion	1	14.94	12.67	14.21	2.44	3.73	3.85	2.85
53	I14_AR3	ActiveIntronRegion	1	24.35	2.43	10.37	0.66	7.03	1.23	8.34
54	ER15a	ExonRegion	0	70.86	60.88	141.00	72.76	61.92	69.90	30.30
55	E15a_E16a	KnownJunction	1	38.24	31.26	56.86	33.51	31.65	40.07	8.61
56	E15a_E17a	NovelJunction	0	26.02	43.51	62.21	51.45	22.71	43.34	34.41
57	ER16a	ExonRegion	1	28.45	37.67	56.37	23.88	29.42	34.91	4.98
58	E16a_E17a	KnownJunction	1	40.06	33.36	71.82	44.10	20.82	31.28	4.63
59	ER17a	ExonRegion	0	49.77	56.32	92.97	57.45	45.74	63.27	23.53
60	E17a_E18a	KnownJunction	1	35.10	41.51	56.91	29.64	39.84	16.54	11.09
61	E17a_E19a	NovelJunction	0	11.95	24.70	26.51	22.95	6.78	46.23	19.33
62	ER18a	ExonRegion	0	37.50	38.29	58.47	30.97	35.29	18.72	11.72
63	E18a_E19a	KnownJunction	1	37.44	32.39	62.22	38.33	36.68	14.58	12.96
64	E19_Aa	NovelBoundary	0	12.27	6.38	18.75	8.78	5.95	1.42	9.13
65	ER19a	ExonRegion	0	71.33	65.58	97.29	70.13	53.73	63.25	33.26
66	E19_Da	NovelBoundary	0	15.71	25.25	29.78	15.77	11.30	17.69	7.70
67	E19a_E20a	KnownJunction	0	35.58	38.22	29.55	30.34	15.15	18.92	17.26
68	E19b_E20a	KnownJunction	0	42.33	38.07	63.26	32.32	23.38	25.94	13.86
69	ER19b	ExonRegion	0	42.26	40.36	56.67	36.30	25.38	32.97	14.92
70	ER20a	ExonRegion	0	74.98	65.52	90.65	55.59	58.71	66.29	36.80
71	E20a_E21a	KnownJunction	0	63.32	44.11	84.04	43.02	43.66	54.14	36.72
72	ER21a	ExonRegion	0	49.00	50.03	67.56	52.31	43.39	55.67	31.04
73	E21a_E22a	KnownJunction	0	50.25	57.25	69.98	62.20	44.93	64.43	28.83
74	ER22a	ExonRegion	0	75.24	60.90	95.65	61.75	78.57	68.64	38.15