Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PML	Gene	0	147.40	267.33	60.63	46.26	39.80	66.78	99.05
2	359928	Transcript	0	0.05	0.16	0.00	0.25	0.05	0.00	0.04
3	395132	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	268059	Transcript	0	0	0	0	0	0	0	0
5	354026	Transcript	0	154.00	542.82	76.85	84.77	39.63	137.86	130.72
6	395135	Transcript	0	4.08	5.47	0.87	3.04	0.25	4.55	1.46
7	268058	Transcript	0	69.51	108.32	40.23	30.79	26.29	30.00	67.58
8	ER1a	ExonRegion	0	26.46	60.67	6.80	9.97	5.71	13.00	16.91
9	E1a_E2a	KnownJunction	0	50.15	173.73	17.22	19.59	14.80	36.47	49.26
10	ER2a	ExonRegion	0	230.28	566.50	75.38	77.31	61.72	109.32	143.81
11	E2a_E3a	KnownJunction	0	303.44	656.60	95.29	74.80	107.82	92.35	204.44
12	ER3a	ExonRegion	0	303.94	652.24	94.72	95.28	91.51	111.35	187.50
13	E3a_E4a	KnownJunction	0	456.59	812.47	185.36	129.58	129.86	202.45	274.40
14	ER4a	ExonRegion	0	454.60	834.23	184.52	127.08	113.20	190.34	277.88
15	E4a_E6a	KnownJunction	0	233.51	311.53	79.28	33.24	54.11	66.14	119.54
16	E4a_E7a	KnownJunction	0	154.00	542.82	76.85	84.77	39.63	137.86	130.72
17	E4a_E8a	NovelJunction	0	9.71	21.33	6.55	8.64	0.00	1.66	6.98
18	E4a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I4_SR2	SilentIntronRegion	0	27.52	34.65	6.22	3.25	8.61	2.96	7.46
20	I4_AR2	ActiveIntronRegion	0	19.12	39.91	4.34	1.45	8.70	5.05	7.19
21	ER5a	ExonRegion	0	0.05	0.16	0.00	0.25	0.05	0.00	0.04
22	ER6a	ExonRegion	0	218.80	291.93	71.54	30.29	55.22	69.32	124.89
23	E6a_E7a	KnownJunction	0	296.60	359.34	88.49	49.63	71.92	76.19	153.49
24	ER7a	ExonRegion	0	350.48	741.62	137.16	113.81	108.68	175.03	261.92
25	E7a_E8a	KnownJunction	0	345.47	633.85	141.36	91.03	99.13	161.79	218.65
26	E7b_E8a	NovelJunction	0	33.81	55.75	8.98	7.61	7.24	11.20	19.86
27	ER7b	ExonRegion	0	6.24	9.72	1.52	4.83	0.51	7.05	2.70
28	ER8a	ExonRegion	0	289.25	509.51	110.27	81.59	90.89	135.46	182.38
29	E8_Da	NovelBoundary	1	132.87	117.49	33.94	5.85	10.00	22.62	32.80
30	E8a_E9a	KnownJunction	0	149.36	249.21	34.70	38.01	25.54	62.47	74.90
31	E8a_E10a	KnownJunction	0	86.80	132.46	36.56	34.35	35.92	28.68	78.26
32	I8	Intron	0	94.77	99.68	25.51	8.34	12.91	12.22	19.35
33	I8_AR1	ActiveIntronRegion	0	95.16	100.10	25.62	8.38	12.96	12.27	19.43
34	E9_Aa	NovelBoundary	1	74.47	325.79	14.10	24.90	14.98	54.64	39.97
35	ER9a	ExonRegion	0	234.95	445.20	79.19	49.50	42.81	102.26	110.22
36	E9_Ab	KnownBoundary	0	238.88	380.49	80.73	39.72	93.83	94.79	112.95
37	ER9b	ExonRegion	0	223.20	381.34	78.34	41.20	41.35	93.99	104.14
38	ER10a	ExonRegion	0	80.87	145.44	50.98	37.99	44.74	32.93	86.41
39	E10_Da	NovelBoundary	0	43.08	53.04	27.55	4.36	21.90	8.09	25.05
40	E10a_E12a	KnownJunction	0	57.88	87.27	36.82	21.24	12.98	20.37	56.81
41	ER11a	ExonRegion	0	1.92	1.21	0.23	1.25	0.00	2.04	0.22
42	ER12a	ExonRegion	0	46.36	94.06	31.31	28.71	12.95	28.54	46.09
43	ER12b	ExonRegion	0	71.37	115.87	41.24	36.32	20.85	38.77	69.65
44	ER12c	ExonRegion	1	75.62	82.37	45.49	31.65	24.87	39.49	70.30
45	IG28_SR1	SilentIntergenicRegion	0	9.45	6.22	9.06	7.78	0.90	5.94	5.50
46	IG28_AR2	ActiveIntergenicRegion	0	16.78	14.58	17.39	12.89	0.81	9.81	8.32
47	IG28_AR3	ActiveIntergenicRegion	0	26.10	17.79	12.60	9.65	0.33	11.35	8.80