Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NEIL1	Gene	0	44.08	17.63	10.25	3.55	12.23	5.55	7.04
2	355059	Transcript	0	22.45	12.45	3.20	1.60	2.78	2.12	2.21
3	336572	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	ER1a	ExonRegion	1	29.60	10.84	2.32	3.04	3.48	4.14	2.72
5	E1a_E2a	KnownJunction	1	16.39	6.78	0.89	0.00	1.18	0.00	0.89
6	E2_Ab	NovelBoundary	0	20.29	18.73	5.19	2.79	3.41	5.55	4.27
7	ER2a	ExonRegion	0	17.34	12.10	2.56	0.60	3.17	0.91	1.88
8	ER2b	ExonRegion	0	25.83	24.66	8.55	1.99	5.80	3.86	6.96
9	E2_Da	KnownBoundary	0	30.48	8.67	10.82	1.63	0.95	1.37	3.24
10	E2a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2c	ExonRegion	0	26.49	20.09	7.01	2.74	3.29	3.43	3.36
12	E2_Ac	KnownBoundary	0	25.59	24.14	6.08	3.03	6.50	5.57	4.14
13	ER2d	ExonRegion	0	22.45	17.57	5.19	2.51	4.67	3.61	4.78
14	E2b_E3a	KnownJunction	0	17.72	13.74	2.62	1.68	5.30	4.98	3.38
15	I2	Intron	0	27.33	6.27	9.67	4.14	7.04	2.46	8.09
16	I2_SR1	SilentIntronRegion	0	22.69	6.10	8.10	5.00	3.81	3.08	8.88
17	I2_AR3	ActiveIntronRegion	0	35.29	7.29	13.80	4.70	7.76	2.99	9.93
18	I2_SR2	SilentIntronRegion	1	22.25	5.87	8.33	3.51	7.50	1.74	6.78
19	I2_AR4	ActiveIntronRegion	0	47.38	7.32	11.80	3.33	15.81	2.26	7.41
20	E3_Aa	NovelBoundary	0	58.55	14.55	13.47	2.76	14.68	1.31	12.87
21	ER3a	ExonRegion	0	68.02	19.08	16.23	7.20	23.84	9.16	8.56
22	E3_Da	NovelBoundary	0	10.97	9.04	3.10	1.63	2.26	5.33	8.08
23	E3a_E4a	KnownJunction	0	60.77	12.19	20.69	4.06	27.25	6.46	6.00
24	E4_Aa	NovelBoundary	0	8.83	9.38	2.10	5.53	3.92	2.28	4.79
25	ER4a	ExonRegion	0	45.83	20.65	12.88	2.28	19.16	6.09	5.55
26	E4a_E5a	KnownJunction	0	46.56	28.24	13.81	1.33	19.43	7.93	8.38
27	I4	Intron	0	5.54	3.45	3.99	3.97	4.02	4.30	8.80
28	I4_AR1	ActiveIntronRegion	0	5.90	3.67	4.20	4.23	4.23	4.40	9.34
29	E5_Aa	NovelBoundary	0	3.37	11.85	2.37	1.68	2.19	4.07	9.04
30	ER5a	ExonRegion	0	47.42	18.67	12.92	6.30	18.18	9.17	11.29
31	E5_Da	NovelBoundary	1	41.56	27.93	18.06	10.92	8.99	9.22	21.93
32	E5a_E6a	KnownJunction	0	17.76	4.57	4.14	0.00	9.13	1.50	1.35
33	I5	Intron	0	20.41	4.73	4.05	3.02	9.34	3.30	6.90
34	I5_AR1	ActiveIntronRegion	0	33.54	8.95	7.61	5.47	14.65	6.66	11.95
35	E6_Aa	NovelBoundary	0	28.34	10.77	5.04	1.68	4.29	32.11	6.76
36	ER6a	ExonRegion	0	42.65	13.66	11.04	3.38	11.16	4.09	9.48
37	E6_Da	NovelBoundary	0	41.24	8.70	6.47	1.46	13.92	1.29	5.73
38	E6a_E7a	KnownJunction	0	24.48	5.10	4.81	1.68	6.20	0.00	1.42
39	I6	Intron	0	24.76	12.98	6.36	3.32	14.05	4.91	9.72
40	I6_AR1	ActiveIntronRegion	0	24.89	13.06	6.40	3.34	14.13	4.94	9.77
41	E7a_E8a	KnownJunction	0	12.12	4.07	2.66	1.63	12.10	1.53	2.38
42	ER7a	ExonRegion	0	20.89	4.73	5.56	2.49	10.01	1.14	2.00
43	I7	Intron	0	29.28	14.39	10.49	3.71	10.71	4.86	9.68
44	I7_AR1	ActiveIntronRegion	0	29.63	14.55	10.62	3.75	10.83	4.91	9.79
45	E8_Aa	NovelBoundary	0	46.30	15.11	11.05	3.90	9.31	11.55	15.19
46	ER8a	ExonRegion	0	30.95	16.75	9.64	1.45	26.96	3.05	4.13
47	E8_Da	NovelBoundary	0	9.41	1.63	5.32	2.76	4.36	1.66	8.71
48	E8a_E9a	KnownJunction	0	50.22	20.94	14.20	1.33	25.45	2.92	5.68
49	E9_Aa	NovelBoundary	0	17.46	2.94	3.22	4.58	6.62	2.76	5.17
50	ER9a	ExonRegion	0	74.14	19.00	14.69	3.22	22.24	10.07	8.66
51	E9_Da	NovelBoundary	0	16.56	9.59	4.73	3.93	11.76	4.07	7.88
52	E9a_E10a	KnownJunction	0	87.56	16.21	14.61	2.55	16.02	16.11	5.55
53	E10_Aa	NovelBoundary	0	15.04	3.13	7.24	1.49	10.17	4.40	6.64
54	ER10a	ExonRegion	0	73.41	22.88	20.70	5.08	19.45	6.83	12.97