Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SPATA5L1	Gene	0	21.94	64.57	38.09	99.62	23.78	50.59	25.23
2	305560	Transcript	0	44.25	112.95	87.36	183.96	52.40	88.04	50.67
3	396655	Transcript	0	7.44	2.17	2.42	1.64	4.11	1.71	2.14
4	IG14_AR8	ActiveIntergenicRegion	0	5.80	9.92	1.74	2.58	1.44	0.76	3.41
5	ER1a	ExonRegion	0	0.77	13.36	2.71	22.45	0.81	7.36	4.05
6	ER1b	ExonRegion	0	9.32	66.60	14.14	100.84	9.27	48.24	15.14
7	E1_Da	KnownBoundary	0	0.73	5.70	2.16	3.09	5.62	0.00	3.17
8	E1a_E2a	KnownJunction	0	26.74	119.38	48.72	193.46	33.77	86.99	33.09
9	ER1c	ExonRegion	0	4.52	3.25	4.71	1.70	9.39	1.91	3.87
10	E1_Db	NovelBoundary	0	71.95	43.53	49.58	37.49	23.97	44.65	31.82
11	E1b_E9a	KnownJunction	1	11.85	3.26	2.54	3.22	0.00	3.22	2.54
12	ER2a	ExonRegion	0	31.99	160.00	69.56	235.53	39.57	108.65	51.01
13	E2a_E3a	KnownJunction	0	33.68	153.16	72.41	291.45	47.86	114.84	56.11
14	I2_AR1	ActiveIntronRegion	0	4.83	12.48	3.72	14.06	8.75	4.64	3.67
15	ER3a	ExonRegion	0	34.30	155.37	80.80	257.78	58.50	88.90	56.30
16	E3a_E4a	KnownJunction	0	31.28	120.35	75.44	261.21	51.02	71.93	50.83
17	ER4a	ExonRegion	0	34.46	128.28	81.07	226.26	47.53	95.22	52.08
18	E4a_E5a	KnownJunction	0	48.53	111.89	94.03	207.38	79.16	99.03	49.93
19	ER5a	ExonRegion	0	64.89	121.19	124.12	181.22	73.96	109.73	63.86
20	E5_Da	NovelBoundary	0	37.72	70.72	48.60	116.63	19.96	82.01	18.22
21	E5a_E6a	KnownJunction	0	59.22	91.27	126.07	93.71	85.76	58.02	50.36
22	E6_Aa	NovelBoundary	0	5.09	2.73	2.82	1.16	2.28	0.00	8.04
23	ER6a	ExonRegion	0	85.02	132.30	145.88	198.77	78.00	97.78	76.23
24	E6a_E7a	KnownJunction	0	62.59	107.40	131.79	173.87	60.88	86.19	76.07
25	ER7a	ExonRegion	0	69.13	99.82	122.65	158.26	63.79	97.21	62.90
26	E7a_E8a	KnownJunction	0	39.99	101.41	79.65	134.45	42.28	109.42	40.24
27	E8_Aa	NovelBoundary	1	9.73	16.21	1.74	1.35	0.00	1.61	2.36
28	ER8a	ExonRegion	0	41.11	79.05	55.44	123.54	23.15	89.33	36.99
29	I8	Intron	1	35.83	58.61	3.29	2.48	0.02	4.77	3.79
30	I8_SR1	SilentIntronRegion	1	6.72	19.51	0.72	1.17	0.00	0.78	0.00
31	I8_AR1	ActiveIntronRegion	1	23.25	116.13	1.20	4.78	0.00	3.68	0.00
32	I8_AR2	ActiveIntronRegion	1	74.76	281.92	4.30	10.04	0.00	17.55	0.17
33	I8_SR2	SilentIntronRegion	1	22.25	51.94	1.08	1.30	0.00	2.04	0.95
34	I8_AR3	ActiveIntronRegion	1	38.94	74.16	2.15	1.02	0.00	2.25	0.40
35	I8_SR3	SilentIntronRegion	1	28.06	59.95	1.57	1.20	0.00	2.42	0.12
36	I8_AR4	ActiveIntronRegion	1	33.80	176.78	2.93	6.60	0.00	8.82	0.77
37	I8_SR4	SilentIntronRegion	1	28.28	44.00	1.47	1.52	0.00	2.21	0.29
38	I8_SR5	SilentIntronRegion	1	23.08	55.22	1.46	0.00	0.00	4.99	0.81
39	I8_AR6	ActiveIntronRegion	1	88.06	77.59	13.57	7.36	0.11	17.02	22.25
40	Ix	Intron	1	55.14	36.24	3.83	1.82	0.00	4.62	1.39
41	Ix_SR1	SilentIntronRegion	0	55.31	36.34	3.84	1.82	0.00	4.64	1.40
42	Ix	Intron	1	34.67	21.39	2.28	0.52	0.00	2.09	0.38
43	Ix_SR1	SilentIntronRegion	0	34.78	21.46	2.28	0.52	0.00	2.10	0.39
44	Ix	Intron	1	47.14	49.11	2.65	1.35	0.00	3.30	1.09
45	Ix_AR1	ActiveIntronRegion	0	69.40	59.52	3.53	1.71	0.00	4.02	1.48
46	Ix_SR1	SilentIntronRegion	0	25.73	39.27	1.82	1.00	0.00	2.62	0.72
47	Ix	Intron	1	35.13	37.24	0.94	1.48	0.00	1.68	0.13
48	Ix_SR1	SilentIntronRegion	0	35.21	37.32	0.94	1.48	0.00	1.68	0.13
49	Ix	Intron	1	42.70	41.70	2.26	1.13	0.00	3.06	1.04
50	Ix_SR1	SilentIntronRegion	0	51.58	53.15	2.52	1.10	0.00	3.73	0.99
51	Ix_AR1	ActiveIntronRegion	0	45.07	61.76	3.34	1.28	0.00	4.10	1.45
52	Ix_AR2	ActiveIntronRegion	0	58.74	52.46	1.93	1.16	0.00	5.28	0.94
53	Ix_SR3	SilentIntronRegion	0	43.82	36.33	1.56	0.82	0.00	2.77	0.61
54	Ix_SR4	SilentIntronRegion	0	32.95	31.90	2.05	1.38	0.00	2.39	1.24
55	Ix_AR4	ActiveIntronRegion	0	35.21	12.67	1.26	0.36	0.00	0.00	0.37
56	Ix_SR5	SilentIntronRegion	0	37.86	28.65	4.02	0.24	0.00	2.27	0.74
57	Ix_AR5	ActiveIntronRegion	0	24.25	25.18	1.68	0.52	0.00	2.10	2.01
58	Ix	Intron	0	51.00	26.40	1.60	0.74	0.00	1.74	0.24
59	Ix_SR1	SilentIntronRegion	0	52.41	27.02	1.65	0.76	0.00	1.79	0.25
60	Ix	Intron	0	26.61	17.55	0.64	1.76	0.00	1.98	1.49
61	Ix_SR1	SilentIntronRegion	0	26.67	17.59	0.64	1.76	0.00	1.98	1.50
62	E9_Aa	NovelBoundary	1	389.28	181.61	204.94	129.90	117.36	451.04	173.22
63	ER9a	ExonRegion	0	5.96	0.00	0.00	0.00	2.93	0.00	0.00