Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 MEGF11 Gene 0 0.91 1.01 20.62 3.36 6.28 1.87 1.47 2 409699 Transcript 0 0.00 0.00 0.10 0.01 0.01 0.00 0.00 3 288745 Transcript 0 0.00 0.00 0.55 0.00 0.00 0.00 0.00 4 395614 Transcript 0 0.00 0.00 1.41 0.00 3.62 0.00 0.00 5 395625 Transcript 0 0 0 0 0 0 0 0 6 360698 Transcript 0 0.48 0.40 0.75 1.11 0.36 0.20 0.45 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.00 0.00 0.65 0.00 1.08 0.00 0.00 9 E1_Ac KnownBoundary 0 0.00 2.52 0.00 0.00 2.35 0.00 0.00 10 ER1c ExonRegion 0 0.00 0.00 2.14 0.38 1.32 0.00 0.00 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E2b KnownJunction 0 0.00 0.00 5.30 1.27 0.99 0.00 0.00 13 E1a_E3a KnownJunction 0 0.00 0.00 0.55 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 0.00 0.00 0.41 0.05 0.04 0.00 0.00 15 ER2b ExonRegion 0 0.00 0.13 8.79 3.29 2.34 0.89 0.00 16 E2a_E3a KnownJunction 0 0.00 1.10 11.45 4.31 5.16 0.00 0.00 17 ER3a ExonRegion 0 0.00 2.17 19.56 4.87 6.57 0.00 0.00 18 E3a_E4a KnownJunction 0 0.00 1.63 12.72 3.93 9.18 0.00 0.00 19 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4a ExonRegion 0 0.00 0.42 11.00 1.23 6.72 0.00 0.00 21 E4a_E5a KnownJunction 0 0.00 0.00 16.80 1.68 6.09 0.00 0.00 22 ER5a ExonRegion 0 0.00 0.00 7.31 2.29 3.93 1.11 0.00 23 E5a_E6a KnownJunction 0 0.00 0.00 3.13 2.98 6.22 3.32 0.00 24 ER6a ExonRegion 0 0.00 0.00 5.61 2.88 4.02 1.08 0.00 25 E6a_E7a KnownJunction 0 0.00 0.00 11.44 2.60 8.90 0.00 0.00 26 ER7a ExonRegion 0 0.31 0.01 10.59 4.06 7.66 0.77 0.00 27 E7a_E8a KnownJunction 0 0.95 0.00 13.35 6.56 5.30 0.00 0.00 28 ER8a ExonRegion 0 0.15 0.63 18.14 5.82 9.61 0.70 0.00 29 E8a_E9a KnownJunction 0 0.00 0.00 21.73 7.78 12.98 0.00 0.00 30 ER9a ExonRegion 0 0.08 0.43 15.16 6.18 10.55 0.55 0.00 31 E9a_E10a KnownJunction 0 1.75 0.00 27.66 4.17 13.90 1.39 0.00 32 ER10a ExonRegion 0 0.61 0.00 19.78 4.00 10.06 0.39 0.00 33 E10a_E11a KnownJunction 0 2.07 0.00 21.66 6.37 10.51 0.00 0.00 34 ER11a ExonRegion 0 1.40 0.00 21.88 4.42 15.45 1.54 1.69 35 E11a_E12a KnownJunction 0 0.85 0.00 17.96 5.74 13.28 0.00 0.00 36 ER12a ExonRegion 0 1.37 1.69 24.22 5.22 10.49 1.12 2.50 37 E12a_E13a KnownJunction 0 0.00 0.00 27.33 5.80 12.19 0.00 0.00 38 ER13a ExonRegion 0 0.39 0.90 27.35 7.08 12.61 1.52 0.48 39 E13a_E14a KnownJunction 0 0.00 0.00 25.33 5.55 7.63 2.30 0.00 40 ER14a ExonRegion 0 0.00 0.00 23.45 5.09 8.21 2.00 0.35 41 E14a_E15a KnownJunction 0 0.00 0.00 20.55 4.69 10.44 1.98 0.00 42 ER15a ExonRegion 0 0.00 0.00 15.07 3.28 7.30 0.11 0.00 43 E15a_E16a KnownJunction 0 0.00 0.00 15.43 3.14 8.02 0.00 0.00 44 ER16a ExonRegion 0 0.45 1.43 11.95 1.15 6.52 1.44 1.58 45 E16a_E17a KnownJunction 0 0.00 0.00 8.22 1.44 2.07 0.00 0.00 46 ER17a ExonRegion 0 0.42 0.00 4.03 0.21 4.39 0.72 0.38 47 E17_Da KnownBoundary 0 1.84 0.00 0.00 0.00 0.00 0.00 0.00 48 E17a_E18a KnownJunction 0 0.00 0.00 2.08 0.00 9.59 0.00 0.00 49 ER17b ExonRegion 0 0.95 0.80 1.49 1.20 0.71 0.41 0.89 50 E17b_E18a KnownJunction 0 0.00 0.00 0.00 1.03 0.00 0.00 0.00 51 E18_Aa NovelBoundary 0 2.67 1.52 9.18 1.22 0.00 0.00 0.57 52 ER18a ExonRegion 0 2.69 1.43 12.62 2.55 9.67 0.00 0.40 53 E18a_E19a KnownJunction 0 0.00 0.00 15.05 4.01 14.52 0.00 0.00 54 ER19a ExonRegion 0 0.45 3.55 19.11 3.74 15.16 0.63 1.19 55 E19a_E20a KnownJunction 0 0.00 0.00 20.18 6.91 19.46 1.10 0.00 56 E20_Aa NovelBoundary 0 2.32 7.93 2.13 3.33 0.00 0.00 1.52 57 ER20a ExonRegion 0 1.23 1.17 22.12 3.19 16.11 1.23 0.87 58 E20a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E20a_E24a KnownJunction 0 0.00 0.00 7.99 1.68 4.26 0.00 0.00 60 I20_AR5 ActiveIntronRegion 0 2.46 0.86 10.16 1.66 7.35 0.00 1.83 61 ER21a ExonRegion 0 0.00 0.00 0.97 0.00 0.02 0.00 0.00 62 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER22a ExonRegion 0 0.00 0.00 1.52 0.00 7.24 0.00 0.00 64 E22a_E23a KnownJunction 0 0.00 0.00 4.87 0.00 10.17 0.00 0.00 65 E23_Aa NovelBoundary 0 0.00 0.00 11.67 0.00 2.90 0.00 0.00 66 ER23a ExonRegion 0 0.00 0.00 1.08 0.00 4.27 0.00 0.00 67 E23_Da NovelBoundary 0 0.80 0.00 11.74 5.42 7.52 0.00 0.00 68 ER24a ExonRegion 0 0.00 0.00 16.74 1.44 3.89 0.41 0.00 69 E24a_E25a KnownJunction 0 0.00 0.00 26.15 2.36 2.35 1.34 0.00 70 ER25a ExonRegion 0 0.75 1.78 32.96 4.82 6.18 4.29 2.71 71 E25_Da NovelBoundary 0 2.75 1.50 14.97 0.00 2.12 2.97 3.25 72 E25a_E26a KnownJunction 0 0.00 0.00 14.57 4.09 0.00 1.26 0.00 73 I25 Intron 0 1.04 1.19 10.35 1.07 1.80 1.05 1.74 74 I25_AR1 ActiveIntronRegion 0 1.04 1.20 10.38 1.08 1.80 1.06 1.74 75 E26_Aa NovelBoundary 0 0.68 0.00 13.94 1.16 2.33 2.76 1.30 76 ER26a ExonRegion 0 1.18 1.44 20.59 3.37 3.25 0.63 2.70 77 E26_Da KnownBoundary 0 3.81 3.94 17.79 3.17 3.37 1.63 2.97 78 ER26b ExonRegion 0 1.45 1.41 29.38 3.50 4.69 3.32 2.57 79 ER26c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80 IG10 Intergenic 0 15.69 10.87 9.86 5.91 22.06 7.16 14.34 81 IG10_AR1 ActiveIntergenicRegion 0 30.03 21.01 17.93 11.59 43.93 13.38 26.92