Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SLC24A1	Gene	0	28.80	21.11	15.35	22.60	19.70	26.25	27.20
2	339868	Transcript	1	5.46	0.00	4.44	0.00	10.90	0.00	21.98
3	399033	Transcript	0	3.57	0.00	0.73	0.00	6.22	0.00	5.46
4	261892	Transcript	0	30.02	23.58	19.48	27.27	13.88	34.65	16.49
5	IG7	Intergenic	0	7.12	11.00	4.83	9.76	2.54	11.63	4.63
6	IG7_AR1	ActiveIntergenicRegion	0	12.69	11.35	4.73	5.64	11.90	6.22	18.26
7	IG7_SR1	SilentIntergenicRegion	0	5.26	9.37	3.75	6.81	0.24	8.81	1.19
8	IG7_AR2	ActiveIntergenicRegion	0	13.02	33.44	11.15	14.47	10.08	20.32	12.73
9	IG7_SR2	SilentIntergenicRegion	0	6.06	8.98	5.41	9.61	0.10	9.40	1.33
10	IG7_AR3	ActiveIntergenicRegion	0	5.37	25.52	11.34	39.73	0.12	45.02	2.08
11	IG7_AR4	ActiveIntergenicRegion	0	7.53	21.06	9.32	39.05	0.00	41.46	3.71
12	IG7_SR4	SilentIntergenicRegion	0	5.82	12.84	3.84	9.46	0.00	16.72	2.13
13	IG7_AR5	ActiveIntergenicRegion	0	9.53	12.14	6.28	12.26	0.00	15.42	1.88
14	IG7_AR6	ActiveIntergenicRegion	0	13.28	10.16	5.74	11.83	17.21	13.16	18.77
15	ER1a	ExonRegion	0	28.35	15.88	14.31	13.69	31.12	15.61	49.20
16	E1_Da	NovelBoundary	1	7.44	5.44	2.30	0.00	6.73	2.47	15.94
17	E1a_E2a	KnownJunction	1	3.55	2.86	4.74	4.58	8.85	5.79	17.84
18	E2_Aa	NovelBoundary	0	2.82	1.02	2.51	2.95	4.75	6.22	7.78
19	ER2a	ExonRegion	1	12.75	13.97	6.13	13.55	17.09	8.73	31.21
20	E2_Da	NovelBoundary	0	4.09	11.30	6.45	8.80	6.69	11.36	2.91
21	E2a_E3a	KnownJunction	0	1.03	0.00	0.69	0.00	2.24	0.00	6.58
22	E2a_E4a	KnownJunction	1	5.46	0.00	4.44	0.00	10.90	0.00	21.98
23	I2	Intron	0	8.74	10.15	4.86	8.73	1.62	11.45	2.21
24	I2_SR1	SilentIntronRegion	0	6.92	8.38	4.39	7.01	2.17	6.49	1.91
25	I2_AR1	ActiveIntronRegion	0	10.62	18.58	5.07	15.36	1.07	29.66	3.43
26	I2_SR2	SilentIntronRegion	0	12.08	10.37	5.85	9.67	0.62	14.53	2.34
27	E3_Aa	NovelBoundary	1	4.94	23.93	2.51	6.83	0.00	29.72	1.66
28	ER3a	ExonRegion	1	2.87	0.79	1.96	0.09	2.46	0.09	9.57
29	E3_Da	NovelBoundary	1	15.49	17.79	9.18	20.54	0.00	15.84	3.27
30	E3a_E4a	KnownJunction	1	3.30	1.63	2.07	0.00	5.46	0.00	12.04
31	I3	Intron	0	6.58	16.31	5.68	13.37	0.42	17.33	2.70
32	I3_SR1	SilentIntronRegion	0	6.59	16.35	5.70	13.39	0.42	17.37	2.71
33	E4_Aa	NovelBoundary	0	7.74	15.13	2.86	25.25	1.18	21.57	2.35
34	ER4a	ExonRegion	1	7.28	3.07	4.72	3.35	11.83	10.02	26.42
35	E4_Da	NovelBoundary	0	3.71	26.11	3.00	23.00	2.21	14.45	4.04
36	E4a_E5a	KnownJunction	1	7.56	1.18	0.85	0.00	7.10	0.00	22.99
37	I4	Intron	0	7.25	12.84	4.32	9.30	0.36	10.02	2.27
38	I4_SR1	SilentIntronRegion	0	5.03	15.89	3.31	7.57	0.42	6.49	1.40
39	I4_SR2	SilentIntronRegion	0	9.48	12.44	4.58	11.00	0.42	12.81	2.84
40	I4_SR3	SilentIntronRegion	0	6.46	10.39	5.17	8.94	0.23	10.10	2.45
41	E5_Aa	NovelBoundary	0	6.51	9.98	2.54	15.52	0.85	16.99	5.72
42	ER5a	ExonRegion	1	12.78	7.88	3.70	3.15	11.24	4.20	25.47
43	E5_Da	NovelBoundary	0	6.49	5.25	3.42	15.01	0.00	14.66	1.49
44	E5a_E6a	KnownJunction	1	8.53	1.63	1.34	0.00	10.90	0.00	29.81
45	I5	Intron	0	7.23	16.31	5.29	14.03	0.13	12.89	2.16
46	I5_SR1	SilentIntronRegion	0	7.24	16.34	5.30	14.06	0.13	12.91	2.16
47	E6_Aa	NovelBoundary	0	6.49	12.27	8.51	9.29	0.90	16.24	0.00
48	ER6a	ExonRegion	1	17.86	5.39	2.66	5.29	17.85	5.44	25.04
49	E6_Da	NovelBoundary	0	7.09	15.11	3.91	9.29	0.00	6.57	2.52
50	E6a_E7a	KnownJunction	1	25.22	4.54	3.33	0.00	26.60	1.50	20.41
51	I6	Intron	0	8.32	8.77	4.65	7.44	0.25	9.31	1.68
52	I6_SR1	SilentIntronRegion	0	8.33	8.78	4.66	7.45	0.25	9.32	1.69
53	E7_Aa	NovelBoundary	1	41.96	27.11	13.61	29.48	0.00	18.68	2.09
54	ER7a	ExonRegion	1	52.08	25.23	13.44	20.45	19.78	26.62	24.94
55	E7_Da	NovelBoundary	1	12.55	33.79	16.04	50.47	0.95	35.51	4.84
56	E7a_E8a	KnownJunction	1	10.36	1.13	2.10	1.63	11.16	0.00	10.36
57	E7a_E9a	KnownJunction	0	3.57	0.00	0.73	0.00	6.22	0.00	5.46
58	I7	Intron	0	18.59	26.76	13.54	33.60	1.69	32.38	3.46
59	I7_AR1	ActiveIntronRegion	1	2.55	1.49	1.91	9.64	0.74	6.24	0.77
60	I7_SR1	SilentIntronRegion	0	19.14	27.63	13.94	34.43	1.73	33.28	3.55
61	E8_Aa	NovelBoundary	0	11.03	17.34	8.74	18.75	0.00	32.67	4.76
62	ER8a	ExonRegion	0	20.22	8.00	9.24	11.85	16.14	3.26	17.48
63	E8_Da	NovelBoundary	1	12.82	40.75	19.16	39.63	1.18	62.18	5.79
64	E8a_E9a	KnownJunction	1	13.20	1.52	3.31	2.33	11.50	0.00	22.31
65	I8	Intron	0	15.64	18.16	7.42	31.06	1.52	23.60	4.12
66	I8_AR1	ActiveIntronRegion	0	15.68	18.20	7.44	31.13	1.53	23.65	4.13
67	E9_Aa	NovelBoundary	0	16.87	21.75	12.90	29.75	4.66	38.06	6.58
68	ER9a	ExonRegion	0	25.92	15.56	8.85	21.01	29.65	14.88	27.85
69	E9_Da	NovelBoundary	1	18.91	16.37	13.12	26.39	2.10	14.07	2.74
70	E9a_E10a	KnownJunction	0	15.61	0.00	4.28	0.00	27.69	0.00	9.23
71	I9	Intron	0	19.98	21.46	11.00	21.61	2.33	29.55	3.86
72	I9_AR1	ActiveIntronRegion	0	20.02	21.51	11.03	21.65	2.34	29.62	3.86
73	E10_Aa	NovelBoundary	1	31.26	50.34	36.69	59.06	1.13	95.92	12.27
74	ER10a	ExonRegion	1	41.60	66.08	36.76	85.54	27.88	95.24	17.50
75	E10_Da	KnownBoundary	0	24.35	74.01	22.94	73.88	32.30	81.28	14.09
76	ER10b	ExonRegion	0	30.02	23.58	19.48	27.27	13.88	34.65	16.49
77	IG8	Intergenic	0	20.55	29.85	25.44	37.02	3.28	53.75	8.75
78	IG8_AR1	ActiveIntergenicRegion	0	21.09	22.78	20.44	28.33	1.28	41.17	6.58
79	IG8_SR1	SilentIntergenicRegion	0	12.43	16.35	13.44	19.88	1.38	24.54	4.78
80	IG8_AR2	ActiveIntergenicRegion	0	17.03	24.07	16.51	26.00	1.96	32.54	5.52
81	IG8_SR2	SilentIntergenicRegion	0	14.79	26.82	17.25	26.87	2.66	29.51	8.46
82	IG8_AR3	ActiveIntergenicRegion	0	26.50	29.98	28.40	37.35	2.63	69.89	9.32
83	IG8_AR5	ActiveIntergenicRegion	0	24.04	44.50	38.63	61.49	5.66	91.06	14.18
84	IG8_SR4	SilentIntergenicRegion	0	36.83	56.35	50.90	81.82	7.28	132.77	16.63
85	IG8_AR6	ActiveIntergenicRegion	0	33.29	37.46	50.59	43.03	9.19	69.96	11.07