Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	INO80	Gene	0	167.10	167.34	178.44	129.88	74.58	109.24	93.20
2	401393	Transcript	0	2.20	1.90	1.44	1.42	2.87	0.00	0.38
3	361937	Transcript	0	52.87	76.96	45.83	53.88	30.36	69.45	34.97
4	263793	Transcript	1	32.89	5.26	31.32	6.70	2.07	1.84	1.12
5	IG41_AR1	ActiveIntergenicRegion	0	4.76	8.34	6.97	9.48	1.19	7.34	1.29
6	ER1a	ExonRegion	0	0.00	0.71	0.11	1.25	0.00	0.00	0.00
7	ER1b	ExonRegion	0	1.29	9.27	2.22	9.64	0.46	4.35	1.33
8	E1a_E2b	KnownJunction	0	7.64	30.37	11.09	30.94	3.11	11.28	5.45
9	ER2a	ExonRegion	0	3.33	10.53	5.42	10.39	1.35	3.68	2.25
10	ER2b	ExonRegion	0	36.04	92.28	60.28	67.05	13.49	61.84	25.33
11	E2a_E3a	KnownJunction	1	55.13	154.11	121.72	120.01	12.26	94.04	49.93
12	E3_Aa	NovelBoundary	1	23.90	2.36	52.60	0.00	5.51	3.22	1.48
13	ER3a	ExonRegion	0	81.36	159.55	147.32	102.08	35.60	97.36	60.35
14	E3a_E4a	KnownJunction	0	95.83	129.23	191.83	99.40	52.74	97.10	66.33
15	ER4a	ExonRegion	0	140.22	138.21	211.98	92.51	72.27	93.32	65.98
16	E4a_E5a	KnownJunction	0	179.38	134.19	233.33	109.66	127.11	79.03	79.55
17	ER5a	ExonRegion	0	252.07	221.70	279.54	169.97	76.66	137.60	101.04
18	E5a_E6a	KnownJunction	0	341.04	245.32	378.87	164.36	101.18	128.21	114.82
19	ER6a	ExonRegion	0	262.31	217.09	284.44	171.09	92.58	105.92	108.15
20	E6a_E7a	KnownJunction	0	158.60	140.55	151.56	104.27	37.05	46.93	53.83
21	ER7a	ExonRegion	0	234.31	186.31	239.08	136.37	70.93	75.41	86.24
22	E7a_E8a	KnownJunction	0	216.97	161.46	203.63	125.19	78.36	72.06	78.31
23	E7a_E9a	NovelJunction	0	2.77	3.57	0.82	4.04	1.08	8.36	3.48
24	ER8a	ExonRegion	0	217.85	148.48	198.76	119.32	85.53	79.94	73.58
25	E8a_E9a	KnownJunction	0	158.34	129.20	145.18	103.54	93.99	78.09	65.49
26	ER9a	ExonRegion	0	233.93	169.24	198.84	136.19	75.94	88.47	91.83
27	E9a_E10a	KnownJunction	0	249.61	195.91	216.36	143.20	83.01	95.54	116.97
28	ER10a	ExonRegion	0	200.91	188.17	213.41	149.79	64.76	102.48	98.37
29	E10a_E11a	KnownJunction	0	180.72	176.52	229.16	138.52	67.52	101.71	84.84
30	ER11a	ExonRegion	0	165.25	145.14	197.69	134.60	58.07	86.70	74.35
31	E11a_E12a	KnownJunction	0	134.49	115.52	181.68	120.20	49.59	66.76	64.29
32	ER12a	ExonRegion	1	208.05	146.38	221.16	128.80	50.98	86.18	57.67
33	E12a_E13a	KnownJunction	1	248.76	204.50	287.45	164.06	67.94	116.55	66.67
34	ER13a	ExonRegion	0	242.18	168.76	257.64	155.58	74.77	104.19	83.65
35	E13a_E14a	KnownJunction	1	251.93	133.01	223.76	128.09	80.75	85.87	70.05
36	ER14a	ExonRegion	0	209.97	142.48	214.35	120.37	75.38	90.34	72.52
37	E14a_E15a	KnownJunction	0	145.54	117.25	170.17	83.20	76.70	92.41	65.67
38	ER15a	ExonRegion	0	139.89	118.49	172.37	100.07	68.59	88.99	72.15
39	E15a_E16a	KnownJunction	0	125.56	114.12	154.57	110.88	56.48	80.75	73.58
40	ER16a	ExonRegion	0	126.42	134.61	173.88	103.53	65.59	73.82	86.28
41	E16a_E17a	KnownJunction	0	148.56	119.38	194.59	98.96	72.85	88.20	98.71
42	ER17a	ExonRegion	0	151.31	147.61	189.22	92.61	71.91	84.44	86.90
43	E17a_E18a	KnownJunction	0	152.75	135.04	192.09	86.23	54.24	59.23	75.60
44	ER18a	ExonRegion	0	235.92	155.58	283.44	123.89	109.86	106.21	121.42
45	E18a_E19a	KnownJunction	0	311.67	217.97	321.00	144.07	147.40	139.36	133.22
46	ER19a	ExonRegion	0	297.88	212.80	321.43	147.26	97.44	126.69	124.77
47	E19a_E20a	KnownJunction	0	240.80	226.43	281.00	172.90	75.47	120.52	130.17
48	ER20a	ExonRegion	0	223.98	190.14	277.38	146.64	106.01	92.23	133.74
49	E20a_E21a	KnownJunction	0	189.81	172.45	226.75	129.36	97.38	66.17	122.06
50	ER21a	ExonRegion	0	195.46	175.50	245.02	126.39	81.25	70.27	120.60
51	E21a_E22a	KnownJunction	0	157.65	158.89	227.22	149.57	61.94	73.00	105.75
52	ER22a	ExonRegion	0	167.46	155.88	239.88	130.82	76.74	83.42	100.37
53	E22a_E23a	KnownJunction	0	187.66	141.84	252.83	114.49	102.65	82.78	94.92
54	ER23a	ExonRegion	0	258.10	153.94	282.28	148.47	93.87	101.17	99.55
55	E23a_E24a	KnownJunction	0	249.58	150.11	256.65	134.02	85.64	88.41	79.75
56	ER24a	ExonRegion	0	188.53	145.40	212.31	118.28	65.94	85.02	83.92
57	E24a_E25a	KnownJunction	0	134.75	121.82	147.21	105.17	80.52	58.37	82.82
58	ER25a	ExonRegion	0	81.67	151.20	112.91	118.32	44.71	75.51	83.01
59	E25a_E26a	KnownJunction	0	94.75	144.57	107.68	82.17	43.80	71.74	75.67
60	ER26a	ExonRegion	0	132.14	164.04	157.88	136.24	79.22	94.03	100.26
61	E26a_E27a	KnownJunction	0	128.83	149.06	158.19	139.95	77.92	82.01	100.13
62	E27_Aa	NovelBoundary	1	51.97	2.55	54.71	0.00	0.00	0.00	0.56
63	ER27a	ExonRegion	0	148.24	180.16	180.45	139.69	95.68	97.48	125.54
64	E27a_E28a	KnownJunction	0	149.59	163.85	199.55	143.10	107.68	120.55	117.26
65	E27a_E29a	NovelJunction	0	7.98	4.15	3.91	8.51	2.12	1.63	0.00
66	ER28a	ExonRegion	0	139.24	166.91	184.30	158.80	102.58	116.75	139.73
67	E28a_E29a	KnownJunction	0	117.98	193.52	188.25	153.31	115.91	74.53	136.79
68	ER29a	ExonRegion	0	130.78	185.69	186.32	164.15	103.11	110.26	137.76
69	E29a_E30a	KnownJunction	0	124.06	154.58	185.38	168.43	94.77	123.71	136.92
70	ER30a	ExonRegion	0	140.00	175.98	184.53	160.13	86.67	124.27	138.99
71	E30a_E31a	KnownJunction	0	134.49	168.01	176.71	146.64	86.72	118.11	122.55
72	ER31a	ExonRegion	0	225.55	205.37	219.14	157.81	112.73	120.74	121.37
73	E31a_E32a	KnownJunction	0	281.53	198.95	273.77	166.29	128.57	150.00	132.52
74	E32_Aa	NovelBoundary	0	61.35	9.20	32.56	13.38	5.51	15.33	11.90
75	ER32a	ExonRegion	0	356.17	237.53	303.89	207.60	153.20	196.30	159.55
76	E32a_E33a	KnownJunction	0	536.65	278.48	362.75	240.89	193.11	202.74	169.14
77	ER33a	ExonRegion	0	435.48	249.09	310.53	218.45	168.02	190.26	193.88
78	E33a_E34a	KnownJunction	0	284.01	192.46	159.04	157.94	118.88	125.85	135.43
79	ER34a	ExonRegion	0	252.35	193.96	165.75	153.02	105.37	138.49	155.01
80	E34_Da	KnownBoundary	0	214.90	207.10	168.38	155.26	118.21	172.80	182.54
81	E34a_E36b	KnownJunction	1	62.45	0.00	57.22	3.01	2.79	0.00	0.00
82	ER34b	ExonRegion	0	139.72	190.84	133.57	151.11	109.56	136.18	140.39
83	E34b_E35a	KnownJunction	0	105.81	174.18	133.64	137.92	83.64	121.99	116.70
84	ER35a	ExonRegion	0	82.75	131.39	89.76	101.20	54.68	100.04	77.14
85	E35a_E36a	KnownJunction	0	125.42	144.70	135.30	80.62	57.91	112.88	85.66
86	ER36a	ExonRegion	0	143.09	191.18	139.03	115.58	59.78	127.42	83.98
87	E36_Ab	KnownBoundary	0	134.75	217.40	138.69	129.12	70.43	118.11	98.03
88	ER36b	ExonRegion	0	126.21	206.80	122.52	124.40	84.46	110.26	86.47
89	E36_Da	KnownBoundary	0	98.49	191.02	99.05	131.64	79.44	102.91	67.37
90	ER36c	ExonRegion	0	152.80	231.89	150.38	170.31	97.37	172.57	110.04
91	E36_Db	KnownBoundary	0	125.73	204.18	108.52	119.80	73.84	161.98	84.91
92	E36b_E36c	KnownJunction	0	4.41	3.10	2.76	1.60	5.74	0.00	0.76
93	ER36d	ExonRegion	0	95.31	145.01	77.50	103.18	58.29	129.71	64.14
94	E36_Ac	KnownBoundary	0	75.97	108.16	63.95	80.16	35.89	92.57	50.36
95	ER36e	ExonRegion	0	92.92	94.29	94.64	66.74	27.80	114.35	45.48
96	ER36f	ExonRegion	0	10.44	8.91	14.17	4.57	2.43	9.19	5.79