Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RPS6KA5	Gene	0	91.14	29.98	74.12	50.99	13.36	14.43	23.94
2	261991	Transcript	0	94.66	34.44	84.70	60.60	14.15	17.59	27.75
3	ER1a	ExonRegion	0	14.25	15.09	16.04	21.32	3.12	10.14	4.21
4	E1a_E2a	KnownJunction	0	29.41	23.25	47.59	53.97	4.61	10.64	10.50
5	I1_SR2	SilentIntronRegion	1	14.67	1.55	16.11	7.21	0.88	2.13	0.61
6	ER2a	ExonRegion	0	37.43	28.16	45.23	62.59	3.79	18.53	13.48
7	E2a_E3a	KnownJunction	0	53.27	32.39	49.76	72.28	4.22	26.64	13.08
8	I2_SR2	SilentIntronRegion	1	10.02	1.57	16.55	2.44	1.15	1.45	0.07
9	ER3a	ExonRegion	0	74.76	48.40	92.55	73.86	10.81	25.25	23.42
10	E3_Da	NovelBoundary	1	16.22	5.02	27.33	7.69	0.85	1.39	0.73
11	E3a_E4a	KnownJunction	0	65.94	35.60	67.20	64.53	13.51	23.26	26.70
12	I3_AR1	ActiveIntronRegion	1	13.54	1.02	17.41	4.10	0.99	0.60	0.25
13	I3_AR2	ActiveIntronRegion	1	17.35	2.42	26.09	7.90	0.79	1.55	1.72
14	E4_Aa	NovelBoundary	1	29.49	0.00	28.05	0.00	2.03	0.00	0.00
15	ER4a	ExonRegion	0	101.96	50.66	104.37	73.40	18.98	21.50	34.04
16	E4a_E5a	KnownJunction	0	104.38	50.31	92.17	66.35	21.25	29.51	33.21
17	ER5a	ExonRegion	0	108.36	40.33	95.29	62.69	14.48	17.47	32.09
18	E5a_E6a	KnownJunction	0	110.49	30.32	93.11	60.28	18.10	13.51	37.71
19	ER6a	ExonRegion	0	126.98	39.80	95.76	55.55	21.81	25.83	34.79
20	E6a_E7a	KnownJunction	0	119.85	40.41	100.05	58.79	20.22	29.91	32.53
21	ER7a	ExonRegion	0	116.41	34.93	104.68	55.87	17.51	22.47	31.24
22	E7_Da	NovelBoundary	1	27.27	1.31	17.42	7.10	2.24	1.63	0.56
23	E7a_E8a	KnownJunction	0	93.75	24.30	82.26	51.39	15.56	19.43	23.83
24	ER8a	ExonRegion	0	93.23	36.57	94.46	56.57	12.60	15.50	31.58
25	E8a_E9a	KnownJunction	0	80.71	39.01	102.04	62.39	17.70	16.62	32.17
26	ER9a	ExonRegion	0	81.98	33.95	95.36	69.87	16.03	16.16	32.48
27	E9a_E10a	KnownJunction	0	75.97	33.31	82.05	64.67	8.05	19.78	25.44
28	ER10a	ExonRegion	0	81.58	35.63	91.88	70.06	17.80	18.47	31.49
29	E10a_E11a	KnownJunction	0	127.16	33.36	125.65	62.36	17.75	13.19	29.72
30	ER11a	ExonRegion	0	123.90	43.17	116.28	63.60	17.33	13.63	31.82
31	E11a_E12a	KnownJunction	0	159.66	41.32	121.40	81.03	19.16	16.13	38.69
32	E12_Aa	NovelBoundary	1	11.35	10.75	3.71	6.18	0.00	0.00	1.39
33	ER12a	ExonRegion	0	150.84	44.03	118.74	93.32	26.25	15.12	37.66
34	E12a_E13a	KnownJunction	0	121.17	27.85	107.99	75.64	12.86	16.29	28.96
35	ER13a	ExonRegion	0	133.06	30.79	94.44	71.73	16.22	17.67	30.62
36	E13a_E14a	KnownJunction	0	106.13	25.75	75.43	63.72	18.65	12.76	24.61
37	ER14a	ExonRegion	0	100.77	32.42	77.45	50.59	14.81	14.54	26.99
38	E14a_E15a	KnownJunction	0	68.96	30.87	56.98	35.98	7.33	9.30	23.20
39	ER15a	ExonRegion	0	70.43	31.18	65.82	43.87	11.06	13.31	31.69
40	E15a_E16a	KnownJunction	0	56.45	38.09	55.76	52.48	10.58	16.72	24.26
41	ER16a	ExonRegion	0	105.84	30.29	81.02	55.26	16.78	19.91	36.21
42	E16a_E17a	KnownJunction	0	132.65	31.84	83.35	53.67	5.39	11.20	28.45
43	ER17a	ExonRegion	0	96.10	23.08	62.89	40.18	12.70	10.12	19.00
44	IG4	Intergenic	0	10.02	2.25	4.76	4.26	1.03	0.86	1.27
45	IG4_AR12	ActiveIntergenicRegion	0	56.19	11.25	35.60	23.25	6.32	11.29	9.20
46	IG4_SR9	SilentIntergenicRegion	0	40.04	6.27	24.31	3.54	0.43	2.45	4.51
47	IG4_AR11	ActiveIntergenicRegion	0	33.15	6.05	24.18	11.80	3.50	2.21	5.38
48	IG4_SR8	SilentIntergenicRegion	0	26.11	7.14	13.51	12.78	1.75	0.42	2.35
49	IG4_AR10	ActiveIntergenicRegion	0	22.59	5.99	19.85	5.64	2.58	0.85	4.51
50	IG4_SR7	SilentIntergenicRegion	0	46.67	10.31	23.81	12.37	5.65	3.46	4.74
51	IG4_AR9	ActiveIntergenicRegion	0	22.38	4.70	9.31	6.52	2.59	1.27	3.49
52	IG4_SR6	SilentIntergenicRegion	0	25.63	5.93	9.36	7.48	1.06	1.26	2.07
53	IG4_AR8	ActiveIntergenicRegion	0	15.96	4.77	6.05	11.98	2.01	1.20	2.68
54	IG4_SR5	SilentIntergenicRegion	0	30.37	4.97	10.10	13.03	1.94	1.63	2.51
55	IG4_AR7	ActiveIntergenicRegion	0	14.48	2.99	4.90	6.84	1.20	0.55	1.88
56	IG4_AR6	ActiveIntergenicRegion	0	14.71	3.59	6.00	5.55	1.84	0.46	1.71
57	IG4_SR4	SilentIntergenicRegion	0	12.69	2.68	5.42	5.33	1.25	0.52	0.91
58	IG4_AR5	ActiveIntergenicRegion	0	11.60	2.37	2.26	3.83	0.78	0.30	0.78
59	IG4_SR3	SilentIntergenicRegion	0	11.29	2.43	0.30	3.74	1.26	0.00	0.00
60	IG4_SR2	SilentIntergenicRegion	0	17.31	2.43	7.24	8.36	1.62	2.81	1.42
61	IG4_AR2	ActiveIntergenicRegion	0	12.31	4.32	5.53	8.95	1.36	0.95	2.28