Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	OTUB2	Gene	0	38.28	17.75	6.48	6.71	22.80	5.08	17.08
2	203664	Transcript	0	25.68	15.12	3.02	6.26	21.25	2.86	16.87
3	ER1a	ExonRegion	0	5.71	6.58	0.32	0.59	4.51	1.14	3.12
4	E1a_E2a	KnownJunction	0	7.68	13.03	0.68	0.00	6.39	0.00	11.97
5	I1_AR2	ActiveIntronRegion	0	8.65	7.69	4.39	12.58	0.24	10.19	1.03
6	E2_Aa	NovelBoundary	0	5.91	13.00	4.20	11.73	1.04	13.94	0.57
7	ER2a	ExonRegion	0	31.61	12.52	3.58	7.70	16.05	5.48	15.67
8	E2_Da	NovelBoundary	1	20.41	8.59	5.86	10.19	0.00	15.65	1.25
9	E2a_E3a	KnownJunction	0	24.58	10.17	2.31	5.77	20.17	2.04	13.24
10	I2	Intron	0	5.73	6.76	2.87	9.92	0.10	9.02	0.80
11	I2_AR1	ActiveIntronRegion	0	16.04	8.77	5.68	7.39	0.34	10.27	1.06
12	I2_SR1	SilentIntronRegion	0	4.64	6.56	2.58	10.21	0.07	8.90	0.77
13	E3_Aa	NovelBoundary	0	7.56	13.85	4.37	10.92	0.00	12.25	0.00
14	ER3a	ExonRegion	0	26.55	19.02	3.65	11.37	20.27	4.82	15.06
15	E3_Da	NovelBoundary	0	9.35	14.92	2.86	20.45	1.18	9.43	1.23
16	E3a_E4a	KnownJunction	0	24.17	11.19	2.28	4.12	37.55	0.00	16.87
17	I3	Intron	0	7.53	8.82	3.70	13.60	0.09	10.48	1.37
18	I3_AR1	ActiveIntronRegion	0	6.58	8.02	2.69	14.27	0.14	13.07	1.37
19	I3_AR2	ActiveIntronRegion	0	8.94	9.94	3.33	12.42	0.10	18.91	1.47
20	I3_SR2	SilentIntronRegion	0	7.45	10.55	4.06	16.05	0.06	11.38	1.43
21	I3_AR7	ActiveIntronRegion	0	12.50	8.24	3.73	24.37	0.58	4.36	2.16
22	E4_Aa	NovelBoundary	0	30.46	17.76	6.87	34.57	0.00	11.18	7.54
23	ER4a	ExonRegion	0	33.80	16.38	4.53	8.67	27.02	4.37	21.27
24	E4_Da	NovelBoundary	1	24.12	8.20	8.88	27.52	3.07	11.47	1.43
25	E4a_E5a	KnownJunction	0	23.22	13.42	1.52	0.00	21.88	0.00	19.19
26	I4	Intron	0	9.36	7.70	3.67	11.69	0.16	6.30	3.06
27	I4_SR1	SilentIntronRegion	0	9.91	9.69	4.43	14.28	0.24	6.10	2.78
28	E5_Aa	NovelBoundary	0	11.90	9.48	10.04	29.26	0.99	16.19	2.24
29	ER5a	ExonRegion	0	36.41	27.56	6.04	20.02	27.06	8.58	26.02
30	E5_Da	NovelBoundary	0	9.05	17.29	6.71	25.74	0.00	22.16	3.65
31	E5a_E6a	KnownJunction	0	27.97	18.63	1.24	4.69	29.25	0.00	25.88
32	I5	Intron	0	6.00	7.75	3.46	8.30	2.95	6.51	1.19
33	I5_SR1	SilentIntronRegion	0	6.02	7.78	3.47	8.33	2.96	6.53	1.19
34	E6_Aa	NovelBoundary	0	5.96	6.94	2.50	7.80	2.93	12.49	0.63
35	ER6a	ExonRegion	0	40.79	17.86	7.06	5.96	23.65	5.09	17.25
36	IG35	Intergenic	0	11.98	14.22	5.90	8.02	6.43	5.59	7.96
37	IG35_AR1	ActiveIntergenicRegion	0	19.29	17.11	6.56	6.64	7.92	4.15	8.09
38	IG35_AR2	ActiveIntergenicRegion	0	24.89	14.33	7.05	8.10	11.51	9.16	11.40
39	IG35_SR1	SilentIntergenicRegion	0	15.70	13.99	5.61	6.39	9.86	13.05	11.17
40	IG35_AR3	ActiveIntergenicRegion	0	14.31	13.84	5.07	5.99	5.23	6.41	7.02
41	IG35_SR2	SilentIntergenicRegion	0	9.41	14.44	6.19	9.20	6.27	5.14	8.12