Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RAB2B	Gene	0	137.58	93.39	119.39	60.96	122.75	92.27	71.70
2	397762	Transcript	1	23.23	17.56	18.11	7.60	32.18	13.41	4.03
3	250404	Transcript	1	32.73	4.19	28.83	3.64	3.42	0.83	3.13
4	304034	Transcript	0	4.37	0.00	2.40	0.00	0.99	0.00	3.30
5	ER1a	ExonRegion	0	0.68	0.13	1.51	0.00	4.32	2.59	2.32
6	ER1b	ExonRegion	0	36.22	35.77	32.96	28.32	68.93	31.15	51.07
7	E1a_E2a	KnownJunction	0	30.43	49.47	20.61	32.29	45.46	38.81	50.00
8	E2_Aa	NovelBoundary	0	47.33	27.03	58.42	37.98	62.73	31.11	25.80
9	ER2a	ExonRegion	0	94.75	102.27	71.60	69.78	45.54	57.84	66.39
10	E2a_E3a	KnownJunction	0	121.62	106.14	87.03	82.82	37.94	82.95	83.75
11	ER3a	ExonRegion	0	82.87	109.48	73.13	76.94	75.48	87.75	90.87
12	E3a_E4a	KnownJunction	0	49.02	87.62	47.90	66.37	126.49	78.07	84.91
13	E3a_E4b	KnownJunction	0	1.87	8.38	8.58	7.29	6.85	1.66	6.26
14	I3	Intron	0	28.21	8.39	15.02	4.68	14.72	2.95	7.83
15	I3_AR1	ActiveIntronRegion	0	28.61	5.65	21.90	4.84	16.50	2.90	8.33
16	I3_SR1	SilentIntronRegion	0	45.50	14.77	21.23	9.00	26.49	3.75	8.81
17	I3_AR3	ActiveIntronRegion	0	49.55	10.64	30.19	11.53	23.44	8.41	12.82
18	ER4a	ExonRegion	0	83.14	89.71	76.82	70.25	151.84	86.42	84.35
19	E4_Ab	KnownBoundary	0	125.89	88.53	102.81	69.68	176.49	97.95	87.48
20	ER4b	ExonRegion	0	141.13	114.77	123.55	87.35	169.09	101.18	100.32
21	E4a_E5a	KnownJunction	0	150.49	121.43	124.09	85.23	152.01	101.92	92.58
22	ER5a	ExonRegion	0	97.72	114.29	101.42	79.08	112.80	102.80	74.64
23	E5a_E6a	KnownJunction	0	77.84	121.35	75.01	73.06	84.67	86.13	48.64
24	ER6a	ExonRegion	0	190.89	144.55	134.29	81.19	155.88	111.73	97.08
25	E6a_E7a	KnownJunction	0	171.64	154.34	151.94	90.27	150.56	126.55	104.91
26	E6a_E8a	NovelJunction	1	1.03	3.47	2.26	0.00	0.00	7.99	0.00
27	ER7a	ExonRegion	0	143.54	138.90	126.98	76.99	132.64	100.61	80.81
28	E7_Da	NovelBoundary	0	63.97	54.64	49.64	33.57	46.75	39.66	25.52
29	E7a_E8c	KnownJunction	0	63.59	0.00	49.09	0.00	0.00	0.00	0.00
30	E7b_E8a	KnownJunction	0	215.30	129.20	128.99	64.29	148.81	89.70	83.85
31	ER7b	ExonRegion	0	209.66	140.11	140.90	73.78	149.15	89.91	86.91
32	ER8a	ExonRegion	0	153.92	96.49	111.39	56.87	116.66	69.47	55.93
33	E8_Da	KnownBoundary	1	145.34	71.04	96.51	30.72	91.84	52.77	20.22
34	E8a_E8b	KnownJunction	0	4.37	0.00	2.40	0.00	0.99	0.00	3.30
35	ER8b	ExonRegion	1	65.55	48.59	50.28	20.00	89.40	24.46	7.90
36	E8_Ab	KnownBoundary	0	1157.51	711.04	718.93	618.35	389.50	558.40	443.70
37	ER8c	ExonRegion	0	122.01	112.35	90.37	63.31	131.21	74.22	52.27
38	E8_Ac	KnownBoundary	0	160.29	147.75	128.63	86.80	141.68	104.47	96.77
39	ER8d	ExonRegion	0	136.28	142.21	109.21	76.10	125.15	98.73	75.27
40	E8_Db	KnownBoundary	0	99.81	125.39	97.89	63.42	103.16	95.09	65.98
41	ER8e	ExonRegion	0	190.77	107.05	179.77	79.91	151.33	143.38	109.04
42	ER8f	ExonRegion	0	3.46	3.95	2.54	2.81	2.83	13.18	1.86
43	IG29	Intergenic	0	4.58	3.46	4.73	3.38	8.14	2.09	4.83
44	IG29_AR20	ActiveIntergenicRegion	0	4.66	12.65	12.61	12.43	37.46	7.19	12.62
45	IG29_AR19	ActiveIntergenicRegion	0	8.11	2.52	9.09	3.63	12.17	1.28	2.98
46	IG29_AR18	ActiveIntergenicRegion	0	7.73	2.81	12.49	1.79	10.88	2.99	3.54
47	IG29_AR17	ActiveIntergenicRegion	0	9.57	2.95	15.83	1.50	12.59	2.82	5.65
48	IG29_AR16	ActiveIntergenicRegion	0	8.92	3.64	12.19	2.49	17.01	2.45	5.92
49	IG29_AR15	ActiveIntergenicRegion	0	6.92	3.10	10.46	2.36	12.69	2.45	4.50
50	IG29_AR14	ActiveIntergenicRegion	0	3.24	1.38	5.34	1.06	11.63	1.23	3.49
51	IG29_AR13	ActiveIntergenicRegion	0	5.25	1.21	7.00	0.00	12.01	1.23	3.37
52	IG29_AR11	ActiveIntergenicRegion	0	6.53	1.08	5.15	0.96	7.55	0.57	5.64
53	IG29_AR9	ActiveIntergenicRegion	0	7.19	0.49	4.43	2.40	12.16	0.16	5.39
54	IG29_AR8	ActiveIntergenicRegion	0	6.24	0.86	3.55	0.00	7.72	1.23	2.52
55	IG29_AR5	ActiveIntergenicRegion	0	7.16	1.12	2.77	0.71	7.75	0.38	3.68
56	IG29_AR4	ActiveIntergenicRegion	0	5.46	1.09	2.23	0.59	8.17	0.47	3.59
57	IG29_AR2	ActiveIntergenicRegion	0	9.96	11.87	7.59	6.36	31.92	5.64	12.63
58	IG29_SR1	SilentIntergenicRegion	0	15.14	41.90	24.44	36.23	66.41	24.50	26.50
59	IG29_AR1	ActiveIntergenicRegion	0	42.44	79.04	76.25	99.33	78.42	59.72	50.85