Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PHF11	Gene	0	188.59	133.82	82.61	44.52	39.34	85.27	71.89
2	378319	Transcript	0	11.48	23.17	5.54	2.53	4.75	5.06	11.65
3	378315	Transcript	0	2.60	5.57	0.65	1.49	0.00	6.83	2.11
4	357596	Transcript	0	5.22	13.14	2.45	2.91	1.14	4.70	1.84
5	IG12_AR1	ActiveIntergenicRegion	0	7.97	3.78	5.42	1.10	6.56	2.95	9.06
6	IG12_AR2	ActiveIntergenicRegion	0	7.43	6.07	5.42	0.00	7.83	0.00	9.11
7	IG12_SR1	SilentIntergenicRegion	0	9.70	2.68	8.74	0.00	8.60	0.98	6.80
8	ER1a	ExonRegion	0	4.35	0.70	3.42	0.93	7.54	0.35	3.47
9	E1_Ab	KnownBoundary	0	6.34	4.26	2.18	1.38	0.99	2.44	4.89
10	ER1b	ExonRegion	0	33.43	39.29	14.37	12.30	9.03	24.85	19.92
11	E1a_E4a	KnownJunction	1	18.61	45.63	7.66	4.12	1.96	9.78	19.82
12	E1a_E5a	KnownJunction	0	2.60	5.57	0.65	1.49	0.00	6.83	2.11
13	ER2a	ExonRegion	0	0.15	1.04	0.57	0.00	0.33	1.10	0.64
14	E2a_E3a	KnownJunction	0	0.78	0.00	0.83	0.00	1.04	0.00	0.59
15	ER3a	ExonRegion	0	9.28	21.22	4.83	7.07	1.24	11.98	2.95
16	E3a_E4a	KnownJunction	1	10.66	30.29	3.56	4.58	1.94	5.71	3.17
17	E3a_E5a	NovelJunction	0	1.80	10.01	0.75	4.88	2.24	1.26	0.00
18	ER4a	ExonRegion	0	101.12	121.79	56.66	30.88	21.68	51.83	53.53
19	E4a_E5a	KnownJunction	0	164.25	124.16	73.16	39.20	39.10	73.30	74.21
20	ER5a	ExonRegion	0	234.47	187.02	103.89	55.46	41.87	101.21	84.19
21	E5a_E6a	KnownJunction	0	334.78	228.27	161.28	65.05	52.77	134.96	100.98
22	ER6a	ExonRegion	0	373.54	235.81	168.11	66.97	54.04	135.74	127.34
23	E6a_E7a	KnownJunction	0	240.30	169.21	122.64	55.32	59.50	88.22	93.58
24	I6	Intron	1	52.02	22.45	22.59	7.44	4.31	6.95	4.04
25	I6_AR2	ActiveIntronRegion	0	59.78	25.75	26.34	7.56	4.08	6.71	5.13
26	I6_AR4	ActiveIntronRegion	1	79.89	35.81	29.87	13.17	7.42	11.16	5.40
27	I6_SR4	SilentIntronRegion	1	28.05	5.23	19.15	3.69	4.97	5.71	1.79
28	E7_Aa	NovelBoundary	1	42.93	9.85	26.93	1.49	5.16	9.43	4.69
29	ER7a	ExonRegion	0	273.50	173.03	118.34	46.32	51.62	96.44	103.99
30	E7_Da	NovelBoundary	1	40.76	11.38	23.61	9.92	1.11	6.86	3.05
31	E7a_E8a	KnownJunction	0	272.51	156.18	94.20	38.98	32.14	85.97	95.30
32	I7	Intron	0	83.32	40.51	38.36	13.67	5.69	17.72	7.43
33	I7_AR1	ActiveIntronRegion	0	83.47	40.58	38.43	13.69	5.70	17.76	7.44
34	E8_Aa	NovelBoundary	1	88.92	27.82	38.18	11.41	2.05	14.10	8.60
35	ER8a	ExonRegion	0	358.86	200.73	153.20	62.04	62.03	114.06	127.38
36	E8a_E9a	KnownJunction	0	302.02	190.42	153.06	57.76	69.71	120.95	116.99
37	ER9a	ExonRegion	0	319.55	184.20	155.56	58.01	74.07	127.14	121.06
38	E9_Da	NovelBoundary	1	43.74	54.72	21.28	15.17	7.63	5.95	11.06
39	E9a_E10a	KnownJunction	0	369.80	158.36	155.31	51.85	75.15	122.80	109.05
40	E10_Aa	NovelBoundary	1	53.02	18.63	15.46	13.30	7.95	6.08	5.85
41	ER10a	ExonRegion	0	407.50	195.89	178.32	70.31	64.70	142.10	113.64
42	E10a_E11a	KnownJunction	0	351.02	170.08	157.02	44.89	61.83	127.00	119.09
43	ER11a	ExonRegion	0	340.61	171.43	150.66	60.93	81.02	125.05	115.64
44	E11a_E12a	KnownJunction	0	336.57	157.34	144.58	65.67	87.37	125.07	90.37
45	ER12a	ExonRegion	0	268.87	226.08	110.06	82.66	65.49	154.33	116.48
46	ER12b	ExonRegion	0	1.54	2.23	0.34	2.08	1.21	1.43	2.70