Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LRCH1	Gene	0	146.85	163.43	128.79	169.39	19.74	100.54	19.66
2	258643	Transcript	0	6.68	0.00	3.43	0.16	0.00	1.23	0.67
3	389798	Transcript	0	0	0	0	0	0	0	0
4	389797	Transcript	0	3.74	6.24	4.33	4.40	0.26	3.23	0.53
5	311191	Transcript	0	613.42	275.78	377.68	377.57	76.21	274.13	52.67
6	ER1a	ExonRegion	0	39.85	76.40	31.88	81.81	4.58	53.87	4.76
7	E1a_E2a	KnownJunction	0	129.05	274.33	103.68	251.41	11.48	140.11	20.12
8	I1_AR5	ActiveIntronRegion	0	31.43	18.67	14.70	18.67	1.92	4.11	2.26
9	ER2a	ExonRegion	0	144.94	345.60	151.99	317.48	24.80	184.92	36.69
10	E2a_E3a	KnownJunction	0	190.48	410.02	154.41	375.10	26.46	203.60	36.87
11	E2a_E4a	NovelJunction	0	8.78	22.15	4.61	17.42	3.30	8.25	0.00
12	ER3a	ExonRegion	0	167.54	348.90	182.31	365.44	31.81	189.38	40.19
13	E3a_E4a	KnownJunction	1	182.60	406.60	204.09	406.39	39.49	221.15	60.18
14	ER4a	ExonRegion	0	239.84	385.10	245.63	375.08	34.75	216.26	44.45
15	E4a_E5a	KnownJunction	0	269.84	379.94	259.51	358.20	41.31	188.16	30.58
16	ER5a	ExonRegion	0	261.03	377.59	305.08	371.80	39.14	217.62	50.95
17	E5a_E6a	KnownJunction	0	197.43	350.57	233.59	359.80	34.97	189.93	45.27
18	ER6a	ExonRegion	0	247.00	385.34	273.66	361.03	41.16	160.99	44.89
19	E6a_E7a	KnownJunction	0	180.77	334.20	219.84	340.05	29.21	140.24	38.95
20	E6a_E8a	NovelJunction	0	16.19	11.03	8.52	9.94	0.00	3.00	0.00
21	ER7a	ExonRegion	0	220.37	326.55	245.56	356.73	33.81	150.76	42.40
22	E7a_E8a	KnownJunction	0	231.36	330.23	241.97	364.08	38.96	140.56	36.99
23	ER8a	ExonRegion	0	333.90	418.68	294.04	389.17	44.03	187.14	39.63
24	E8a_E9a	KnownJunction	0	507.99	436.39	397.11	437.55	45.94	260.52	38.98
25	ER9a	ExonRegion	0	471.84	453.86	392.99	478.01	57.27	251.43	44.84
26	E9_Da	NovelBoundary	1	160.91	9.77	116.46	1.00	0.00	3.16	2.49
27	E9a_E10a	KnownJunction	0	431.23	342.82	357.58	377.32	50.44	200.89	41.05
28	E9a_E11a	NovelJunction	0	11.07	7.78	6.85	10.13	0.00	3.32	0.00
29	E9b_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER9b	ExonRegion	0	13.36	0.00	6.86	0.33	0.00	2.45	1.35
31	E10_Ab	NovelBoundary	0	196.59	145.33	155.21	159.46	18.23	88.68	15.78
32	ER10a	ExonRegion	0	412.52	369.11	348.06	390.30	54.13	211.28	41.38
33	ER10b	ExonRegion	0	379.47	365.93	344.32	385.21	52.80	204.62	38.19
34	E10_Da	NovelBoundary	1	48.15	10.96	16.51	22.03	1.18	1.42	1.25
35	E10a_E11a	KnownJunction	0	327.12	377.52	309.74	383.96	54.20	234.66	40.30
36	I10_AR1	ActiveIntronRegion	0	52.51	13.35	23.43	21.02	1.12	6.53	1.55
37	ER11a	ExonRegion	0	339.27	411.39	343.83	433.74	46.85	251.33	53.51
38	E11a_E12a	KnownJunction	0	390.14	429.80	368.04	480.41	48.71	296.94	54.47
39	ER12a	ExonRegion	0	321.02	410.77	382.19	461.46	49.57	279.31	55.46
40	E12a_E13a	KnownJunction	0	255.01	334.30	326.98	366.65	48.39	234.36	46.92
41	ER13a	ExonRegion	0	229.72	360.88	301.22	430.27	42.62	266.94	45.85
42	E13a_E14a	KnownJunction	0	139.11	258.41	159.70	329.21	33.56	199.77	24.99
43	I13	Intron	0	33.98	15.60	29.25	11.20	2.81	5.58	2.34
44	I13_AR1	ActiveIntronRegion	0	37.72	12.83	24.38	6.03	1.35	3.49	1.52
45	I13_SR1	SilentIntronRegion	0	26.59	13.14	25.78	9.42	2.72	4.46	2.39
46	I13_AR2	ActiveIntronRegion	0	44.74	19.07	34.01	16.95	3.37	8.58	4.28
47	I13_AR3	ActiveIntronRegion	0	30.60	20.51	27.56	12.66	3.13	4.57	1.44
48	I13_SR3	SilentIntronRegion	0	60.87	26.45	51.33	15.70	4.67	8.45	3.03
49	I13_AR4	ActiveIntronRegion	0	53.77	17.75	39.77	13.46	3.48	12.69	2.42
50	E14_Aa	NovelBoundary	0	45.11	27.16	42.61	27.23	1.06	12.65	3.21
51	ER14a	ExonRegion	0	207.18	313.30	233.45	341.51	33.07	228.47	36.88
52	E14_Da	NovelBoundary	0	35.67	12.45	35.19	15.36	3.83	0.00	2.42
53	E14a_E15a	KnownJunction	0	191.13	269.70	221.38	259.75	32.41	184.65	31.43
54	I14	Intron	0	22.79	8.99	30.21	11.17	0.32	2.34	1.53
55	I14_SR1	SilentIntronRegion	0	22.86	9.02	30.31	11.21	0.33	2.34	1.53
56	ER15a	ExonRegion	0	193.71	253.76	275.16	315.14	36.79	201.97	37.70
57	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	1.08	0.00	1.02	0.00
58	E15a_E17a	KnownJunction	0	226.82	247.66	320.24	356.09	42.53	212.17	45.72
59	I15_AR5	ActiveIntronRegion	0	36.79	12.62	14.95	3.71	2.01	2.85	2.46
60	ER16a	ExonRegion	0	7.12	8.91	5.40	4.41	0.79	4.72	0.84
61	E16a_E17a	KnownJunction	0	4.11	9.83	7.60	7.72	0.00	3.94	0.76
62	ER17a	ExonRegion	0	228.34	274.28	251.97	321.47	41.42	220.69	36.78
63	E17a_E18a	KnownJunction	0	300.25	250.94	223.98	295.65	49.96	219.17	36.90
64	ER18a	ExonRegion	0	394.36	286.98	280.58	330.99	50.20	238.87	50.77
65	E18a_E19a	KnownJunction	0	488.05	288.93	322.67	312.20	50.53	241.20	49.14
66	ER19a	ExonRegion	0	626.31	339.80	382.84	421.41	77.91	307.22	54.71
67	E19a_E20a	KnownJunction	0	4.64	14.79	0.89	14.52	0.00	4.98	0.00
68	E19a_E21a	KnownJunction	0	755.24	327.34	453.11	439.53	92.88	310.85	58.46
69	I19_SR2	SilentIntronRegion	1	30.16	7.05	22.81	5.98	0.89	2.64	2.56
70	I19_SR3	SilentIntronRegion	0	30.43	10.12	24.92	10.07	0.94	2.81	2.02
71	ER20a	ExonRegion	0	41.68	26.40	22.34	18.60	3.10	11.55	2.17
72	E20_Da	NovelBoundary	0	63.94	5.04	30.54	13.22	2.14	5.74	2.57
73	I20	Intron	0	30.10	11.14	23.84	11.44	1.03	5.65	2.63
74	I20_AR4	ActiveIntronRegion	1	34.74	11.00	31.02	14.48	1.03	3.84	4.04
75	I20_SR3	SilentIntronRegion	0	55.83	13.98	46.51	14.85	1.42	12.92	3.88
76	I20_AR5	ActiveIntronRegion	0	34.97	9.17	24.16	9.46	0.25	4.63	2.88
77	E21_Aa	NovelBoundary	1	132.15	15.42	79.84	19.23	2.31	15.89	3.47
78	ER21a	ExonRegion	0	471.61	224.21	302.25	315.62	59.54	237.41	46.89
79	IG38_AR1	ActiveIntergenicRegion	0	159.62	99.46	137.47	120.43	25.67	90.64	21.29
80	IG38_AR2	ActiveIntergenicRegion	0	136.29	130.41	109.24	147.47	26.80	124.43	24.17