Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZCCHC8	Gene	0	207.09	239.77	221.88	226.24	150.32	270.94	54.26
2	336229	Transcript	0	203.64	246.50	235.09	218.81	172.27	237.62	53.67
3	IG48	Intergenic	0	6.12	5.67	4.51	6.20	1.56	13.64	1.69
4	IG48_AR2	ActiveIntergenicRegion	0	13.34	11.05	8.97	15.24	3.02	27.27	3.75
5	IG48_SR1	SilentIntergenicRegion	0	3.68	3.16	2.75	3.78	0.37	8.23	0.68
6	ER1a	ExonRegion	1	155.47	124.38	108.54	124.49	63.34	136.47	17.29
7	E1a_E2a	KnownJunction	1	271.45	114.49	203.33	132.85	140.46	168.09	23.09
8	ER2a	ExonRegion	1	273.77	193.67	205.61	180.11	227.79	210.87	27.79
9	E2a_E3a	KnownJunction	1	201.95	212.54	144.52	175.39	297.98	194.16	20.78
10	ER3a	ExonRegion	1	321.77	274.33	225.69	231.19	250.17	243.22	31.94
11	E3a_E4a	KnownJunction	1	386.21	311.50	290.07	267.47	254.64	279.31	32.68
12	E3a_E5a	NovelJunction	0	5.59	13.11	11.54	17.34	1.18	22.51	0.00
13	ER4a	ExonRegion	1	438.89	291.89	324.33	273.10	277.28	286.55	43.16
14	E4a_E5a	KnownJunction	0	274.87	200.16	263.05	196.71	206.30	216.38	44.47
15	ER5a	ExonRegion	0	241.26	203.94	248.82	189.14	186.92	201.49	41.38
16	E5a_E6a	KnownJunction	0	199.80	178.65	221.59	189.20	162.71	190.39	32.40
17	E5a_E8a	NovelJunction	0	16.96	58.40	29.01	30.37	21.51	34.46	5.26
18	E5a_E9a	NovelJunction	1	2.49	5.15	2.99	3.85	2.31	16.16	0.00
19	I5_AR1	ActiveIntronRegion	1	60.97	5.62	51.08	5.92	12.85	1.36	1.58
20	E6_Aa	NovelBoundary	1	108.75	21.12	65.72	18.61	17.94	3.89	6.51
21	ER6a	ExonRegion	0	225.23	224.84	265.13	182.58	116.76	201.90	54.78
22	E6_Da	NovelBoundary	1	75.91	34.13	69.65	48.74	21.85	51.51	5.04
23	E6a_E7a	KnownJunction	0	132.25	210.43	208.30	188.09	122.16	186.71	63.85
24	E7_Aa	NovelBoundary	1	73.97	33.60	86.94	40.26	19.57	62.95	3.90
25	ER7a	ExonRegion	0	138.77	219.28	228.62	189.54	130.13	185.44	62.96
26	E7_Da	NovelBoundary	1	70.62	10.14	70.64	19.70	2.95	5.68	3.67
27	E7a_E8a	KnownJunction	0	118.03	218.16	204.63	164.47	149.45	151.02	50.39
28	I7	Intron	0	66.10	11.39	74.35	17.38	8.91	9.26	5.19
29	I7_AR1	ActiveIntronRegion	0	66.31	11.42	74.59	17.43	8.94	9.29	5.21
30	E8_Aa	NovelBoundary	1	53.29	6.65	59.19	12.27	10.28	15.38	4.11
31	ER8a	ExonRegion	0	146.58	254.64	235.21	209.45	168.00	209.16	58.24
32	E8a_E9a	KnownJunction	0	135.84	251.02	228.52	240.70	135.85	255.48	58.77
33	ER9a	ExonRegion	0	161.40	292.90	282.03	261.53	143.93	280.56	72.25
34	E9a_E10a	KnownJunction	0	135.12	276.48	265.28	244.44	146.45	272.31	62.28
35	E10_Aa	NovelBoundary	1	56.73	1.63	114.00	3.36	0.00	3.83	0.62
36	ER10a	ExonRegion	0	173.23	290.59	294.12	248.56	166.35	261.45	62.42
37	E10a_E11a	KnownJunction	0	153.75	286.62	285.29	238.75	169.76	255.40	67.46
38	ER11a	ExonRegion	0	205.66	297.57	315.65	253.62	172.25	271.30	77.90
39	E11a_E12a	KnownJunction	0	115.54	270.46	184.07	193.97	200.79	227.93	61.93
40	I11_SR1	SilentIntronRegion	0	36.62	8.37	47.61	14.08	4.47	14.36	3.84
41	ER12a	ExonRegion	0	192.69	307.68	268.73	279.45	239.65	289.04	96.03
42	E12_Da	NovelBoundary	0	56.65	9.30	53.23	19.10	11.34	11.04	8.30
43	E12a_E13a	KnownJunction	0	219.96	304.88	294.89	257.23	163.17	326.21	99.07
44	I12	Intron	0	53.56	10.07	47.68	24.89	8.01	16.22	7.66
45	I12_AR1	ActiveIntronRegion	0	63.71	11.10	57.08	24.10	7.99	14.87	9.50
46	I12_SR1	SilentIntronRegion	0	72.75	14.98	68.27	32.28	5.58	29.42	11.99
47	I12_AR2	ActiveIntronRegion	0	74.25	14.58	61.98	31.33	4.66	30.96	9.44
48	I12_SR2	SilentIntronRegion	0	42.59	8.64	37.57	25.01	8.54	15.70	5.71
49	ER13a	ExonRegion	0	144.95	311.45	174.24	284.93	108.22	315.08	71.07
50	E13a_E14a	KnownJunction	0	123.17	292.82	162.27	271.51	101.29	283.70	57.57
51	E14_Aa	NovelBoundary	1	63.15	11.64	92.36	7.07	0.90	13.51	1.66
52	ER14a	ExonRegion	0	210.71	240.21	214.99	239.28	149.44	316.18	57.23
53	IG47_AR4	ActiveIntergenicRegion	0	11.59	9.29	12.22	10.31	6.79	10.91	3.12
54	IG47_AR2	ActiveIntergenicRegion	0	7.10	4.48	12.95	1.81	2.34	2.34	3.35