Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RIC8B	Gene	0	14.41	15.37	24.63	20.94	54.06	41.33	13.00
2	392839	Transcript	0	6.62	8.34	12.22	8.30	29.59	25.47	6.50
3	392837	Transcript	1	0.88	0.00	4.31	11.38	16.62	10.75	3.15
4	355478	Transcript	0	0.31	0.48	0.82	0.25	0.60	0.49	0.26
5	392836	Transcript	0	0	0	0	0	0	0	0
6	392835	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	261399	Transcript	0	1.32	2.95	0.66	3.03	3.52	3.76	0.86
8	ER1a	ExonRegion	0	0.26	0.00	0.68	0.00	1.21	1.84	0.00
9	ER1b	ExonRegion	0	2.34	6.48	0.68	3.88	10.02	9.05	0.57
10	E1_Ac	KnownBoundary	0	9.38	18.02	10.58	18.61	24.21	22.51	4.00
11	ER1c	ExonRegion	0	1.82	11.61	0.47	6.73	8.21	14.31	0.77
12	E1_Ad	KnownBoundary	0	1.34	7.93	2.80	6.07	1.01	14.55	0.60
13	ER1d	ExonRegion	0	7.51	13.62	7.84	16.54	5.27	34.98	2.97
14	E1a_E2a	KnownJunction	0	14.75	14.76	17.70	19.67	14.25	46.85	7.62
15	I1_AR6	ActiveIntronRegion	0	3.07	4.40	3.13	2.49	1.32	11.95	0.67
16	I1_AR7	ActiveIntronRegion	0	3.07	3.78	2.56	2.49	1.62	13.08	0.15
17	I1_AR8	ActiveIntronRegion	0	2.43	3.64	2.94	2.49	1.62	9.81	0.56
18	I1_AR9	ActiveIntronRegion	0	2.90	4.86	4.06	3.74	1.53	8.85	0.67
19	ER2a	ExonRegion	0	20.08	21.72	33.71	27.20	21.60	45.90	9.18
20	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E2a_E5a	KnownJunction	1	15.34	26.82	37.84	30.10	37.85	39.69	9.40
22	E3_Aa	NovelBoundary	0	6.86	9.01	3.00	5.91	4.08	6.91	2.36
23	ER3a	ExonRegion	0	1.26	1.93	3.28	1.02	1.33	1.98	1.04
24	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	0	27.63	32.85	62.74	55.29	120.90	88.18	24.63
27	E5_Da	NovelBoundary	0	2.09	9.43	9.00	11.24	16.25	29.51	4.94
28	E5a_E7a	KnownJunction	0	24.53	36.12	60.86	61.71	127.46	66.20	25.98
29	E6_Aa	NovelBoundary	0	5.47	4.31	4.54	10.76	23.05	17.93	3.43
30	ER6a	ExonRegion	0	3.96	4.03	2.88	6.60	13.23	10.32	1.42
31	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER7a	ExonRegion	0	26.06	38.95	47.15	54.96	95.00	86.23	23.29
33	E7a_E8a	KnownJunction	0	35.63	34.34	58.37	62.17	122.55	90.18	26.20
34	ER8a	ExonRegion	0	28.62	21.59	51.63	41.67	106.42	70.10	19.47
35	E8a_E9a	KnownJunction	1	28.72	9.62	45.17	27.99	107.98	45.67	21.01
36	ER9a	ExonRegion	0	36.77	22.06	58.97	34.64	96.07	58.87	23.10
37	E9a_E10a	KnownJunction	0	36.10	22.65	51.79	27.01	100.46	71.72	22.01
38	E10_Aa	NovelBoundary	1	16.02	0.00	22.37	1.14	0.97	2.65	0.75
39	ER10a	ExonRegion	0	33.09	29.79	45.15	32.92	119.36	60.12	23.89
40	E10a_E11a	KnownJunction	0	24.90	31.18	38.87	21.56	86.77	73.00	17.80
41	ER11a	ExonRegion	0	18.46	25.39	36.82	30.40	78.24	65.07	19.34
42	E11a_E12a	KnownJunction	0	0.67	1.26	0.00	1.60	0.00	1.58	0.00
43	E11a_E13a	KnownJunction	1	1.75	14.37	22.27	16.80	36.61	22.70	12.04
44	E11a_E17a	KnownJunction	0	11.13	14.74	25.22	14.22	49.36	50.49	9.33
45	E12_Aa	NovelBoundary	0	2.07	3.18	6.19	8.59	1.96	2.09	2.38
46	ER12a	ExonRegion	0	1.96	7.18	0.42	5.29	4.37	5.23	2.90
47	E12_Da	NovelBoundary	0	6.03	4.60	4.97	9.35	5.49	12.06	1.56
48	E12a_E13a	KnownJunction	0	0.00	2.26	0.00	1.68	0.00	1.66	0.00
49	I12_AR1	ActiveIntronRegion	0	3.49	4.84	2.00	4.56	3.92	10.79	2.06
50	ER13a	ExonRegion	0	4.35	10.94	14.07	12.18	34.43	21.94	8.61
51	E13_Da	NovelBoundary	0	3.05	8.25	2.20	1.68	6.85	6.16	1.98
52	E13a_E14a	KnownJunction	0	0.00	2.73	0.00	0.00	4.59	1.37	0.67
53	E13a_E15a	NovelJunction	1	1.79	14.95	6.78	9.86	5.88	1.21	2.28
54	E13a_E17a	KnownJunction	1	0.88	0.00	4.31	11.38	16.62	10.75	3.15
55	I13_AR3	ActiveIntronRegion	0	1.86	5.95	0.68	10.04	12.74	3.74	6.00
56	I13_SR3	SilentIntronRegion	0	2.22	8.82	0.41	6.49	9.85	5.13	6.76
57	I13_AR4	ActiveIntronRegion	0	3.17	10.19	0.68	7.68	8.93	4.15	5.11
58	ER14a	ExonRegion	1	0.43	6.07	1.54	1.03	6.07	9.81	1.00
59	E14a_E15a	KnownJunction	0	1.03	5.65	1.02	0.00	4.26	5.41	1.45
60	E14a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	1.06	0.00	0.00
61	I14_SR2	SilentIntronRegion	0	5.68	3.67	3.33	2.56	7.86	10.86	4.08
62	I14_AR2	ActiveIntronRegion	0	4.26	5.61	3.92	2.27	11.07	5.57	4.88
63	ER15a	ExonRegion	0	7.92	9.26	10.10	8.51	15.78	18.75	3.80
64	E15_Da	NovelBoundary	0	3.29	10.69	0.00	1.11	7.58	8.01	3.07
65	E15a_E16a	KnownJunction	0	7.84	8.85	4.97	6.29	18.63	7.42	3.12
66	ER16a	ExonRegion	0	9.95	10.46	10.53	14.88	22.47	23.95	5.98
67	E16a_E17a	KnownJunction	1	8.45	2.15	4.91	14.74	10.12	24.31	4.20
68	I16_AR2	ActiveIntronRegion	0	5.92	11.40	5.77	7.15	13.62	14.34	6.89
69	I16_SR3	SilentIntronRegion	0	4.95	7.83	3.52	6.48	12.61	6.70	5.40
70	ER17a	ExonRegion	0	25.51	23.63	47.24	32.39	88.56	76.04	24.29
71	E17_Da	KnownBoundary	0	1.55	1.42	2.50	2.68	17.84	4.21	3.17
72	E17_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	E17_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
74	E17_Dd	KnownBoundary	0	4.09	1.50	2.96	5.36	19.39	6.78	2.82
75	ER17b	ExonRegion	0	5.76	4.86	9.14	9.98	39.28	16.55	9.44
76	ER17c	ExonRegion	0	5.38	4.86	7.45	9.14	36.71	14.30	8.10
77	ER17d	ExonRegion	0	7.43	4.86	8.13	9.14	38.33	13.49	8.10
78	ER17e	ExonRegion	0	8.48	10.29	10.75	10.69	38.20	24.07	10.17