Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SLC35E3	Gene	0	30.81	9.48	17.11	4.12	55.24	5.43	37.17
2	398004	Transcript	0	23.44	9.81	11.69	2.43	38.78	4.81	32.40
3	319429	Transcript	0	14.30	6.19	7.69	2.17	9.23	2.52	25.63
4	IG46_SR1	SilentIntergenicRegion	0	1.88	0.53	2.57	2.38	7.58	0.76	0.99
5	IG46_SR2	SilentIntergenicRegion	0	3.26	0.00	4.80	0.85	10.29	0.00	1.65
6	ER1a	ExonRegion	0	10.53	2.53	3.99	0.00	23.98	1.78	13.40
7	E1_Ab	KnownBoundary	0	18.53	5.04	10.75	0.00	13.60	4.48	29.84
8	ER1b	ExonRegion	1	13.73	9.01	4.14	0.30	8.96	4.03	23.71
9	E1_Da	KnownBoundary	1	12.53	10.01	2.66	0.00	5.28	1.42	19.25
10	E1a_E1c	KnownJunction	0	13.22	7.67	4.96	1.68	0.00	1.66	19.85
11	E1_Ac	KnownBoundary	0	7.46	1.52	3.41	0.00	19.13	1.37	6.55
12	ER1c	ExonRegion	0	26.59	14.58	8.81	1.25	25.43	6.13	29.68
13	ER1d	ExonRegion	0	24.16	12.26	12.74	2.73	41.25	4.75	33.65
14	E1_Db	KnownBoundary	0	6.69	1.63	4.61	0.00	15.05	1.55	8.94
15	E1b_E1d	KnownJunction	0	10.77	6.09	8.36	1.57	0.00	1.58	16.94
16	E1_Ad	KnownBoundary	1	9.43	7.20	7.62	4.23	28.91	2.55	18.99
17	ER1e	ExonRegion	0	25.36	12.39	16.80	3.74	54.91	4.90	37.91
18	ER1f	ExonRegion	0	29.75	11.26	15.22	3.59	61.19	4.63	50.70
19	E1_Dc	KnownBoundary	1	14.60	3.78	4.40	3.33	16.85	4.23	20.54
20	E1c_E1e	KnownJunction	0	18.93	4.81	9.74	3.25	27.69	4.31	40.11
21	E1_Ae	KnownBoundary	1	9.08	1.00	3.84	0.00	16.37	1.29	21.84
22	ER1g	ExonRegion	0	30.23	11.74	13.10	2.49	46.43	4.90	59.81
23	ER1h	ExonRegion	0	39.41	11.21	18.48	2.52	67.11	5.03	60.29
24	E1d_E2a	KnownJunction	0	57.38	12.74	30.16	1.44	50.72	5.60	56.59
25	ER2a	ExonRegion	0	52.32	16.89	28.39	3.77	85.34	6.54	65.29
26	E2a_E3a	KnownJunction	0	63.94	9.17	23.11	4.66	102.65	8.63	60.61
27	ER3a	ExonRegion	0	52.57	11.12	27.60	7.18	108.57	3.76	71.69
28	E3a_E4a	KnownJunction	0	53.27	9.35	26.93	5.93	91.52	1.07	50.46
29	ER4a	ExonRegion	0	52.36	16.82	26.49	5.98	101.79	3.69	68.63
30	E4a_E5a	KnownJunction	0	34.63	10.48	15.53	4.85	89.45	6.54	70.91
31	I4	Intron	0	8.90	1.27	5.07	0.92	14.98	0.27	4.72
32	I4_SR1	SilentIntronRegion	0	8.91	1.27	5.07	0.92	15.00	0.27	4.72
33	E5_Aa	NovelBoundary	0	12.20	2.84	4.56	1.33	18.65	0.00	6.00
34	ER5a	ExonRegion	0	41.38	10.84	21.65	5.07	80.28	5.30	60.99
35	E5_Da	KnownBoundary	0	33.13	12.08	15.56	5.58	64.48	1.21	36.40
36	ER5b	ExonRegion	0	24.51	7.83	15.75	4.69	43.13	6.31	21.20
37	IG47_AR1	ActiveIntergenicRegion	0	21.23	1.28	7.61	0.68	24.30	0.00	13.27
38	IG47_SR1	SilentIntergenicRegion	0	6.22	0.00	7.04	0.00	7.63	0.00	4.71
39	IG47_AR2	ActiveIntergenicRegion	0	17.86	3.67	11.38	1.47	24.95	4.08	14.44
40	IG47_SR2	SilentIntergenicRegion	0	7.94	0.69	1.46	0.48	8.31	0.12	3.34