Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF385A	Gene	0	89.99	109.66	81.14	158.83	39.13	216.62	153.79
2	338010	Transcript	0	0	0	0	0	0	0	0
3	352268	Transcript	1	9.41	20.96	3.92	15.36	0.00	4.69	40.72
4	394313	Transcript	1	2.31	0.71	1.47	1.54	2.57	9.12	7.10
5	IG31	Intergenic	0	10.63	3.72	11.05	17.70	0.39	120.45	14.94
6	IG31_SR2	SilentIntergenicRegion	0	9.00	3.49	10.03	10.98	0.35	91.62	13.57
7	IG31_AR2	ActiveIntergenicRegion	0	10.70	2.05	13.53	16.33	0.05	110.46	17.12
8	IG31_SR1	SilentIntergenicRegion	0	11.10	4.03	11.01	19.83	0.44	130.27	15.05
9	ER1a	ExonRegion	1	3.87	2.12	16.57	31.47	3.36	13.88	17.42
10	E1a_E2b	KnownJunction	1	10.30	7.04	35.18	89.59	6.41	44.89	94.06
11	ER2a	ExonRegion	0	2.31	0.71	1.47	1.54	2.57	9.12	7.10
12	E2_Ab	KnownBoundary	0	3.22	0.00	2.82	1.63	2.24	16.16	9.37
13	ER2b	ExonRegion	1	9.27	11.76	24.71	81.83	17.98	109.12	73.76
14	E2a_E3a	KnownJunction	1	16.17	20.96	68.60	149.87	51.73	146.57	203.88
15	E2a_E4a	NovelJunction	1	0.00	0.00	2.28	5.99	2.35	22.46	4.06
16	E2a_E5a	NovelJunction	1	0.00	0.00	0.59	1.52	0.00	10.37	0.53
17	E2a_E6a	NovelJunction	0	0.00	0.00	0.53	8.40	0.88	5.09	0.00
18	ER3a	ExonRegion	1	52.07	86.13	99.77	190.68	58.23	174.49	252.52
19	E3a_E4a	KnownJunction	0	86.09	150.01	85.72	180.67	49.59	176.80	209.75
20	E3a_E5a	NovelJunction	1	0.58	3.70	0.89	7.67	0.00	25.73	0.00
21	ER4a	ExonRegion	0	83.63	163.76	98.96	223.94	55.38	216.57	213.64
22	E4a_E5a	KnownJunction	0	126.23	131.41	124.48	200.45	54.24	210.24	154.75
23	E4a_E6a	KnownJunction	1	9.41	20.96	3.92	15.36	0.00	4.69	40.72
24	I4	Intron	0	9.02	3.78	5.23	3.10	8.78	7.70	9.61
25	I4_SR2	SilentIntronRegion	0	16.93	5.07	8.10	3.38	11.72	8.28	11.32
26	I4_AR2	ActiveIntronRegion	0	18.20	4.27	7.84	3.31	15.59	6.99	12.52
27	I4_AR3	ActiveIntronRegion	0	6.62	3.83	5.74	3.51	7.83	7.38	10.35
28	ER5a	ExonRegion	0	130.29	150.30	142.42	221.58	59.82	301.30	176.19
29	E5_Da	NovelBoundary	0	3.66	7.96	3.61	0.00	19.94	10.56	13.83
30	E5a_E6a	KnownJunction	0	154.52	171.16	204.37	249.08	51.59	361.18	230.52
31	I5	Intron	0	6.82	4.93	4.34	2.52	9.59	11.38	12.64
32	I5_SR1	SilentIntronRegion	0	6.91	5.00	4.40	2.55	9.71	11.53	12.80
33	ER6a	ExonRegion	0	120.62	187.40	158.97	241.37	51.64	313.66	252.89
34	E6a_E7a	KnownJunction	0	124.27	196.25	157.00	242.76	85.20	260.52	294.02
35	ER7a	ExonRegion	0	97.80	158.02	99.10	180.43	54.39	233.86	213.36
36	E7a_E8a	KnownJunction	0	96.75	149.48	102.81	167.07	54.45	235.06	237.99
37	ER8a	ExonRegion	0	102.10	109.02	71.25	153.04	36.26	230.02	145.19
38	ER8b	ExonRegion	0	4.61	4.86	2.71	8.73	0.81	11.03	4.05