Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CS	Gene	0	436.49	560.61	619.45	771.37	854.05	436.04	676.43
2	393996	Transcript	0	5.59	3.21	4.24	6.39	6.43	3.57	11.65
3	351328	Transcript	0	57.41	215.79	123.15	300.77	91.01	152.28	165.80
4	IG38	Intergenic	0	6.40	5.93	5.61	6.39	19.19	5.77	15.24
5	IG38_AR6	ActiveIntergenicRegion	0	11.12	8.77	8.23	10.42	49.43	6.95	27.88
6	IG38_SR7	SilentIntergenicRegion	0	3.96	3.06	3.11	4.27	24.72	6.36	10.41
7	IG38_AR5	ActiveIntergenicRegion	0	11.15	5.99	12.66	4.93	40.46	4.08	20.74
8	IG38_SR6	SilentIntergenicRegion	0	3.91	3.55	3.60	3.50	11.15	3.48	8.71
9	IG38_AR4	ActiveIntergenicRegion	0	5.92	6.50	4.74	8.19	12.78	4.94	14.61
10	IG38_SR5	SilentIntergenicRegion	0	6.84	4.63	3.74	6.90	6.67	5.78	10.81
11	IG38_AR3	ActiveIntergenicRegion	0	2.66	9.47	10.02	11.01	3.71	12.31	14.50
12	IG38_AR2	ActiveIntergenicRegion	0	4.01	6.80	7.66	12.53	10.84	14.34	18.97
13	IG38_SR4	SilentIntergenicRegion	0	9.78	10.16	6.65	17.00	15.90	16.27	25.63
14	IG38_AR1	ActiveIntergenicRegion	0	10.33	17.45	7.55	11.94	15.65	11.65	28.49
15	IG38_SR3	SilentIntergenicRegion	0	8.18	12.20	4.23	6.40	7.18	8.96	18.87
16	IG38_SR2	SilentIntergenicRegion	0	7.97	6.61	4.21	3.70	12.84	6.75	20.16
17	ER1a	ExonRegion	0	21.13	92.11	35.48	128.84	38.26	67.44	49.22
18	E1a_E2a	KnownJunction	0	4.27	5.60	2.79	5.80	0.83	2.39	4.36
19	E1a_E3a	KnownJunction	0	57.41	215.79	123.15	300.77	91.01	152.28	165.80
20	ER2a	ExonRegion	0	8.28	2.77	4.89	7.62	10.59	5.66	13.13
21	E2a_E3a	KnownJunction	0	4.21	1.26	5.04	5.74	7.88	2.65	17.46
22	ER3a	ExonRegion	1	97.14	308.67	195.63	442.74	175.66	236.79	327.32
23	E3a_E4a	KnownJunction	0	121.57	339.40	206.99	458.22	260.11	269.53	394.31
24	ER4a	ExonRegion	0	249.27	507.91	342.74	597.72	460.87	347.62	466.36
25	E4a_E5a	KnownJunction	0	299.73	532.81	407.03	609.04	476.11	377.47	471.59
26	E4a_E6a	NovelJunction	0	13.37	43.87	30.36	79.27	43.36	69.60	9.01
27	ER5a	ExonRegion	0	346.41	611.92	551.08	739.85	1167.67	455.18	697.25
28	E5a_E6a	KnownJunction	0	524.56	668.63	771.73	812.08	1315.26	485.83	867.90
29	ER6a	ExonRegion	0	542.66	803.03	783.62	982.13	813.55	611.36	850.37
30	E6a_E7a	KnownJunction	0	373.40	693.70	569.91	826.39	742.49	505.23	644.17
31	E7_Aa	NovelBoundary	1	150.74	4.23	219.52	8.40	2.35	15.65	6.35
32	ER7a	ExonRegion	0	492.92	786.35	747.94	974.21	1276.59	572.96	873.69
33	E7a_E8a	KnownJunction	0	482.77	691.04	738.51	994.46	1247.46	476.96	894.65
34	ER8a	ExonRegion	0	522.63	810.40	740.27	1042.24	1068.25	545.63	965.93
35	E8a_E9a	KnownJunction	0	450.56	705.07	676.11	960.95	1139.78	462.22	887.39
36	E9_Aa	NovelBoundary	1	167.52	9.77	257.82	14.98	16.11	7.53	19.22
37	ER9a	ExonRegion	0	425.66	721.19	597.45	922.81	1118.73	445.22	888.35
38	E9a_E10a	KnownJunction	0	421.67	758.54	622.18	1008.55	955.17	500.51	989.70
39	ER10a	ExonRegion	0	364.62	778.91	605.06	1006.75	1133.17	475.09	954.19
40	E10a_E11a	KnownJunction	0	389.38	780.94	589.20	988.34	1154.44	409.66	876.94
41	ER11a	ExonRegion	0	419.44	824.56	645.26	1094.23	1104.17	489.17	981.78
42	E11a_E12a	KnownJunction	0	399.24	687.97	582.65	995.79	1214.84	386.27	785.00
43	ER12a	ExonRegion	0	530.19	526.51	729.53	783.08	907.30	469.73	677.41
44	IG37	Intergenic	0	1.77	2.89	4.01	8.13	1.13	10.01	1.95
45	IG37_AR3	ActiveIntergenicRegion	0	2.22	2.77	4.52	8.94	1.62	9.06	2.17
46	IG37_SR1	SilentIntergenicRegion	0	1.26	4.82	4.79	14.80	2.93	14.40	2.83
47	IG37_AR2	ActiveIntergenicRegion	0	2.88	4.86	5.00	16.83	1.62	12.26	3.71
48	IG37_AR1	ActiveIntergenicRegion	0	1.69	3.00	4.44	8.00	1.05	11.58	1.88